RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 GSTO1P78417 241 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 GRB14Q14449 540 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 SNX17Q15036 470 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 NEUROD6Q96NK8 337 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
SNRPA1-208ENST00000559686 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 SEPT4O43236 478 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 CIAO1O76071 339 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 GH2P01242 217 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 HOXC6P09630 235 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 ADORA2AP29274 412 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 TFF2Q03403 129 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 ADGRE1Q14246 886 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 GBF1Q92538 1859 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.05□□□□□ -0.642e-8■□□□□ 10.7
SNRPA1-208ENST00000559686 PBX4Q9BYU1 374 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 HCN4Q9Y3Q4 1203 aa11.05□□□□□ -0.64
SNRPA1-208ENST00000559686 PGK1P00558 417 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 RAB3GAP1Q15042 981 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 SKIV2LQ15477 1246 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 CATSPERGQ6ZRH7 1159 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 LRFN3Q9BTN0 628 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 C1QTNF1Q9BXJ1 281 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 XPNPEP3Q9NQH7 507 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
SNRPA1-208ENST00000559686 FOCADQ5VW36 1801 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 APBB1O00213 710 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 KIAA0355O15063 1070 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 COBLO75128 1261 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 UBTFL1P0CB47 393 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 ACRP10323 421 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 KCNQ1P51787 676 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 TFCP2Q12800 502 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 PLS1Q14651 629 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 SPATA5Q8NB90 893 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 SLC44A5Q8NCS7 719 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 LENG1Q96BZ8 264 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 FLT1P17948 1338 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
SNRPA1-208ENST00000559686 ZNF236Q9UL36 1845 aa11.02□□□□□ -0.64
SNRPA1-208ENST00000559686 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 FAM86C2PA6NEL3 165 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 VCAM1P19320 739 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 ALYREFQ86V81 257 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 NKX2-4Q9H2Z4 354 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 SNRKQ9NRH2 765 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 PHF24Q9UPV7 400 aa11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-208ENST00000559686 CHD7Q9P2D1 2997 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 HLA-DOAP06340 250 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 RARBP10826 455 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 BMP1P13497 986 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 ERCC3P19447 782 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 TMEM240Q5SV17 173 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 IER5LQ5T953 404 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 C1orf53Q5VUE5 145 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 NAA16Q6N069 864 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 NCAPG2Q86XI2 1143 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 MYO5AQ9Y4I1 1855 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 PTPRCP08575 1304 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 MYH1P12882 1939 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
SNRPA1-208ENST00000559686 BAG3O95817 575 aa11□□□□□ -0.65
SNRPA1-208ENST00000559686 IGHA2P01877 340 aa11□□□□□ -0.65
SNRPA1-208ENST00000559686 TAL1P17542 331 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms