RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FOCADQ5VW36 1801 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
TPM1-216ENST00000558910 OSBPP22059 807 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 TDO2P48775 406 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 PDE1AP54750 535 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 BACE1P56817 501 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 IRX3P78415 501 aaPredicted RBP14.4□□□□□ -0.1
TPM1-216ENST00000558910 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 TMED8Q6PL24 325 aaPredicted RBP14.4□□□□□ -0.1
TPM1-216ENST00000558910 METTL16Q86W50 562 aaKnown RBP14.4□□□□□ -0.1
TPM1-216ENST00000558910 APPBP2Q92624 585 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 TRIM47Q96LD4 638 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
TPM1-216ENST00000558910 EHD4Q9H223 541 aa14.4□□□□□ -0.1
TPM1-216ENST00000558910 ZCCHC17Q9NP64 241 aaKnown RBP14.4□□□□□ -0.1
TPM1-216ENST00000558910 AKR1B1P15121 316 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 TATDN1Q6P1N9 297 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
TPM1-216ENST00000558910 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 PAGR1Q9BTK6 254 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
TPM1-216ENST00000558910 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
TPM1-216ENST00000558910 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 CDK8P49336 464 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 GABPAQ06546 454 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 USP17L2Q6R6M4 530 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 CHD1LQ86WJ1 897 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 P2RX7Q99572 595 aaKnown RBP14.38□□□□□ -0.11
TPM1-216ENST00000558910 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
TPM1-216ENST00000558910 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 BAZ2AQ9UIF9 1905 aaKnown RBP14.38□□□□□ -0.11
TPM1-216ENST00000558910 ADGRA2Q96PE1 1338 aa14.38□□□□□ -0.11
TPM1-216ENST00000558910 CENPFP49454 3210 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 HTTP42858 3142 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 PRDM1O75626 825 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
TPM1-216ENST00000558910 BCRP11274 1271 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 GUCY1A2P33402 732 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 PABPC4Q13310 644 aaKnown RBP eCLIP14.37□□□□□ -0.11
TPM1-216ENST00000558910 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
TPM1-216ENST00000558910 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 RAET1EQ8TD07 263 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 TBC1D2Q9BYX2 928 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 EPB41L4AQ9HCS5 686 aaPredicted RBP14.37□□□□□ -0.11
TPM1-216ENST00000558910 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 MYPNQ86TC9 1320 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 SALL3Q9BXA9 1300 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 LAMB1P07942 1786 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 MYH7P12883 1935 aa14.37□□□□□ -0.11
TPM1-216ENST00000558910 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
TPM1-216ENST00000558910 FCGRTP55899 365 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 PRKCZQ05513 592 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 SH3D19Q5HYK7 790 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 SPICE1Q8N0Z3 855 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
TPM1-216ENST00000558910 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 NUCB1Q02818 461 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 ICA1Q05084 483 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 AAMPQ13685 434 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 WDR78Q5VTH9 848 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 IFNL3Q8IZI9 196 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 NAPBQ9H115 298 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
TPM1-216ENST00000558910 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
TPM1-216ENST00000558910 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 SLC45A1Q9Y2W3 748 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 PTPRFP10586 1907 aa14.35□□□□□ -0.11
TPM1-216ENST00000558910 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
TPM1-216ENST00000558910 HOXD10P28358 340 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 HERVK_113P62684 666 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 NMIQ13287 307 aaPredicted RBP14.34□□□□□ -0.11
TPM1-216ENST00000558910 VPS53Q5VIR6 699 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 C16orf86Q6ZW13 317 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
TPM1-216ENST00000558910 TANGO6Q9C0B7 1094 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 RPAP3Q9H6T3 665 aaPredicted RBP14.34□□□□□ -0.11
TPM1-216ENST00000558910 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
TPM1-216ENST00000558910 DDX60LQ5H9U9 1706 aaKnown RBP14.33□□□□□ -0.12
TPM1-216ENST00000558910 A0A0D9SFI3 127 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 ELNP15502 786 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 GNAT2P19087 354 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 VCAM1P19320 739 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 USP14P54578 494 aa14.33□□□□□ -0.12
TPM1-216ENST00000558910 MLLT1Q03111 559 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms