RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMEM201Q5SNT2 666 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 FBXW10Q5XX13 1052 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 ANKS3Q6ZW76 656 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 LRP10Q7Z4F1 713 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 RBBP8NLQ8NC74 664 aaPredicted RBP6.6□□□□□ -1.35
CASC4-206ENST00000558847 MRFAP1L1Q96HT8 127 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 SHDQ96IW2 340 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 FOXQ1Q9C009 403 aa6.6□□□□□ -1.35
CASC4-206ENST00000558847 TMEM265A0A087WTH1 108 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 DNAJA2O60884 412 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
CASC4-206ENST00000558847 SLITRK5O94991 958 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 HTR3BO95264 441 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 EOMESO95936 686 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 CEACAM5P06731 702 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 ANGEL2Q5VTE6 544 aaKnown RBP6.59□□□□□ -1.35
CASC4-206ENST00000558847 GK5Q6ZS86 529 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 TMEM87BQ96K49 555 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
CASC4-206ENST00000558847 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
CASC4-206ENST00000558847 PPT2Q9UMR5 302 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
CASC4-206ENST00000558847 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.36
CASC4-206ENST00000558847 PLCG1P19174 1290 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 ETFBP38117 255 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 OXCT1P55809 520 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 RAB33AQ14088 237 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
CASC4-206ENST00000558847 KSR1Q8IVT5 923 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
CASC4-206ENST00000558847 LRRN4CLQ8ND94 238 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
CASC4-206ENST00000558847 MIPEPQ99797 713 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 MKNK2Q9HBH9 465 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 ACTR10Q9NZ32 417 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 REV1Q9UBZ9 1251 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 ADAMTS6Q9UKP5 1117 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 PCDHB14Q9Y5E9 798 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 SLC12A7Q9Y666 1083 aa6.58□□□□□ -1.36
CASC4-206ENST00000558847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
CASC4-206ENST00000558847 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
CASC4-206ENST00000558847 KLF4O43474 513 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
CASC4-206ENST00000558847 SERINC3Q13530 473 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 SLC6A19Q695T7 634 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 CCDC81Q6ZN84 652 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 MFSD2AQ8NA29 543 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 SLC38A3Q99624 504 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 TM9SF2Q99805 663 aa6.57□□□□□ -1.36
CASC4-206ENST00000558847 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 SMAD7O15105 426 aaKnown RBP6.56□□□□□ -1.36
CASC4-206ENST00000558847 HMGB1P09429 215 aaKnown RBP6.56□□□□□ -1.36
CASC4-206ENST00000558847 CASP7P55210 303 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 CLCQ05315 142 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 LETMD1Q6P1Q0 360 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
CASC4-206ENST00000558847 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
CASC4-206ENST00000558847 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 GTF2IRD1Q9UHL9 959 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 PLAGL2Q9UPG8 496 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 MAPK8IP1Q9UQF2 711 aa6.56□□□□□ -1.36
CASC4-206ENST00000558847 CNTNAP4Q9C0A0 1308 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 TLDC2A0PJX2 215 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
CASC4-206ENST00000558847 IKZF1Q13422 519 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 BMS1Q14692 1282 aaKnown RBP6.55□□□□□ -1.36
CASC4-206ENST00000558847 FXNQ16595 210 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 C22orf34Q6ZV56 151 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 FAM13CQ8NE31 585 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 XAGE3Q8WTP9 111 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 CYB5D2Q8WUJ1 264 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 GMIPQ9P107 970 aa6.55□□□□□ -1.36
CASC4-206ENST00000558847 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
CASC4-206ENST00000558847 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 UPK3BL1B0FP48 263 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 UPK3BL2E5RIL1 263 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 RBAK-RBAKDNI3L0D1 243 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
CASC4-206ENST00000558847 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 LSRQ86X29 649 aaPredicted RBP6.54□□□□□ -1.36
CASC4-206ENST00000558847 HNRNPLLQ8WVV9 542 aaKnown RBP6.54□□□□□ -1.36
CASC4-206ENST00000558847 SRPK1Q96SB4 655 aaKnown RBP6.54□□□□□ -1.36
CASC4-206ENST00000558847 TNKS2Q9H2K2 1166 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 PRDM7Q9NQW5 492 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 PRDM5Q9NQX1 630 aaPredicted RBP6.54□□□□□ -1.36
CASC4-206ENST00000558847 KLHL3Q9UH77 587 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
CASC4-206ENST00000558847 CLSTN1O94985 981 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
CASC4-206ENST00000558847 NCLP19338 710 aaKnown RBP6.53□□□□□ -1.36
CASC4-206ENST00000558847 GUCY2CP25092 1073 aa6.53□□□□□ -1.36
CASC4-206ENST00000558847 YARSP54577 528 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms