RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 PDE4DIPQ5VU43 2346 aa13.11□□□□□ -0.31
PBX1-213ENST00000558796 PLIN4Q96Q06 1357 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 RAD21O60216 631 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
PBX1-213ENST00000558796 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
PBX1-213ENST00000558796 PDE4BQ07343 736 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 POTEEQ6S8J3 1075 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 MORF4L1Q9UBU8 362 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 TMX2Q9Y320 296 aa13.1□□□□□ -0.31
PBX1-213ENST00000558796 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
PBX1-213ENST00000558796 SPDYE16A6NNV3 312 aaPredicted RBP13.09□□□□□ -0.31
PBX1-213ENST00000558796 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
PBX1-213ENST00000558796 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 HOXD10P28358 340 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
PBX1-213ENST00000558796 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
PBX1-213ENST00000558796 RAET1EQ8TD07 263 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
PBX1-213ENST00000558796 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 HIP1O00291 1037 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 CNMDO75829 334 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 FGAP02671 866 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
PBX1-213ENST00000558796 PRMT2P55345 433 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 HAND2P61296 217 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 ERVK-9P63128 1117 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 ERVK-24P63145 666 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 ALX1Q15699 326 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 GPRC5AQ8NFJ5 357 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
PBX1-213ENST00000558796 LPAR1Q92633 364 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 ARMC5Q96C12 935 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 IL25Q9H293 177 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
PBX1-213ENST00000558796 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 ZMYM6O95789 1325 aa13.08□□□□□ -0.32
PBX1-213ENST00000558796 MYH6P13533 1939 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
PBX1-213ENST00000558796 FLOT1O75955 427 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 FLT3LGP49771 235 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 TFAP4Q01664 338 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 Q3C1V9 767 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
PBX1-213ENST00000558796 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
PBX1-213ENST00000558796 COA7Q96BR5 231 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
PBX1-213ENST00000558796 PORCNQ9H237 461 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
PBX1-213ENST00000558796 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
PBX1-213ENST00000558796 NMT2O60551 498 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 ELNP15502 786 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 GRK4P32298 578 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
PBX1-213ENST00000558796 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 TBC1D10CQ8IV04 446 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
PBX1-213ENST00000558796 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 RABGAP1Q9Y3P9 1069 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 SMCHD1A6NHR9 2005 aa13.06□□□□□ -0.32
PBX1-213ENST00000558796 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 ADCY3O60266 1144 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 TTLL1O95922 423 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 NDUFB10O96000 172 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 COG2Q14746 738 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 WDR78Q5VTH9 848 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 CWC22Q9HCG8 908 aaKnown RBP13.05□□□□□ -0.32
PBX1-213ENST00000558796 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
PBX1-213ENST00000558796 NEDD4P46934 1319 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 MCM3APO60318 1980 aa13.05□□□□□ -0.32
PBX1-213ENST00000558796 F5H6K3 240 aa13.04□□□□□ -0.32
PBX1-213ENST00000558796 ORC4O43929 436 aa13.04□□□□□ -0.32
PBX1-213ENST00000558796 NEFLP07196 543 aa13.04□□□□□ -0.32
PBX1-213ENST00000558796 MAPK4P31152 587 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms