RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 CCDC122Q5T0U0 273 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 WASF1Q92558 559 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 SLIT3O75094 1523 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 A0A1B0GUA9 196 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 GOLGA6L7A0A1B0GV03 622 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 PPP1R3GB7ZBB8 358 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 RNMTO43148 476 aaKnown RBP12.58□□□□□ -0.4
PCAT29-201ENST00000558411 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 LSP1P33241 339 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 PDCLQ13371 301 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 PDIA6Q15084 440 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 SNCBQ16143 134 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 TAX1BP1Q86VP1 789 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 CCDC13Q8IYE1 715 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
PCAT29-201ENST00000558411 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 ZNF473Q8WTR7 871 aaKnown RBP12.58□□□□□ -0.4
PCAT29-201ENST00000558411 CAPZA3Q96KX2 299 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 TRIM10Q9UDY6 481 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 KCNG1Q9UIX4 513 aa12.58□□□□□ -0.4
PCAT29-201ENST00000558411 ADAMTS13Q76LX8 1427 aa12.57□□□□□ -0.4
PCAT29-201ENST00000558411 FOXP2O15409 715 aa12.57□□□□□ -0.4
PCAT29-201ENST00000558411 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
PCAT29-201ENST00000558411 TOB1P50616 345 aaPredicted RBP12.57□□□□□ -0.4
PCAT29-201ENST00000558411 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
PCAT29-201ENST00000558411 HERVK_113P62684 666 aa12.57□□□□□ -0.4
PCAT29-201ENST00000558411 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
PCAT29-201ENST00000558411 SLC40A1Q9NP59 571 aa12.57□□□□□ -0.4
PCAT29-201ENST00000558411 TNRQ92752 1358 aa12.57□□□□□ -0.4
PCAT29-201ENST00000558411 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 PDE2AO00408 941 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 FGAP02671 866 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 EZRP15311 586 aaKnown RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 PRLRP16471 622 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 STX17P56962 302 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 NTRK3Q16288 839 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 PTGISQ16647 500 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 C6orf89Q6UWU4 347 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 RAB11FIP4Q86YS3 637 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 OSBP2Q969R2 916 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 ARL8AQ96BM9 186 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 CHP1Q99653 195 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 ZNF213O14771 459 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 PPP1R37O75864 691 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 FAM107AO95990 144 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 HAND2P61296 217 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 GRIN1Q05586 938 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 C2orf54Q08AI8 447 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 CD302Q8IX05 232 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 ATP6V0A4Q9HBG4 840 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCAT29-201ENST00000558411 RWDD2AQ9UIY3 292 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 ADAMTS7Q9UKP4 1686 aa12.56□□□□□ -0.4
PCAT29-201ENST00000558411 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 RTN2O75298 545 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 MMP1P03956 469 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 SLC8A1P32418 973 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 SLC8A3P57103 927 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 DPYDQ12882 1025 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 APOA5Q6Q788 366 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 AIDAQ96BJ3 306 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 MYD88Q99836 296 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 CYLC1P35663 651 aaPredicted RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 ZKSCAN8Q15776 578 aaPredicted RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 MEA1Q16626 185 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TCP11X2Q5H9J9 407 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 RNF187Q5TA31 235 aaPredicted RBP12.55□□□□□ -0.4
PCAT29-201ENST00000558411 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
PCAT29-201ENST00000558411 NLRP14Q86W24 1093 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms