RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 TNKSO95271 1327 aa12.31□□□□□ -0.44
LRRC28-204ENST00000558172 PRC1O43663 620 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 NMT2O60551 498 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 AOC2O75106 756 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
LRRC28-204ENST00000558172 HMGCS2P54868 508 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
LRRC28-204ENST00000558172 PABPC4Q13310 644 aaKnown RBP eCLIP12.3□□□□□ -0.44
LRRC28-204ENST00000558172 WTAPQ15007 396 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 NKX2-3Q8TAU0 364 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
LRRC28-204ENST00000558172 ZCCHC17Q9NP64 241 aaKnown RBP12.3□□□□□ -0.44
LRRC28-204ENST00000558172 F5H6K3 240 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 ALDH1A1P00352 501 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
LRRC28-204ENST00000558172 LIFRP42702 1097 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 ANTXR2P58335 489 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 KLRC3Q07444 240 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 SEC23AQ15436 765 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
LRRC28-204ENST00000558172 RUFY3Q7L099 469 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 ANKRD23Q86SG2 305 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 ENAHQ8N8S7 591 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-204ENST00000558172 GMCL1P1Q8NEA9 526 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 KAT14Q9H8E8 782 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
LRRC28-204ENST00000558172 PARP14Q460N5 1801 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 WDR46O15213 610 aaKnown RBP12.28□□□□□ -0.44
LRRC28-204ENST00000558172 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-204ENST00000558172 MAP2K1Q02750 393 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-204ENST00000558172 MOGSQ13724 837 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
LRRC28-204ENST00000558172 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
LRRC28-204ENST00000558172 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 ZIC5Q96T25 663 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 AGTPBP1Q9UPW5 1226 aa12.28□□□□□ -0.44
LRRC28-204ENST00000558172 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 BTBD19C9JJ37 291 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 SH2B2O14492 632 aaPredicted RBP12.27□□□□□ -0.45
LRRC28-204ENST00000558172 RAD21O60216 631 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 OSBPP22059 807 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 FGD1P98174 961 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 PNMA1Q8ND90 353 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 DCAF4Q8WV16 495 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 PTPN18Q99952 460 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 PNMA3Q9UL41 463 aa12.27□□□□□ -0.45
LRRC28-204ENST00000558172 CCDC69A6NI79 296 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 PDHXO00330 501 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 NDUFB10O96000 172 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 BMP3P12645 472 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 VCAM1P19320 739 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 SYNE3Q6ZMZ3 975 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 CATSPERGQ6ZRH7 1159 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 Q6ZUG5 572 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 ALDH8A1Q9H2A2 487 aaPredicted RBP12.26□□□□□ -0.45
LRRC28-204ENST00000558172 LY9Q9HBG7 655 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 MYH6P13533 1939 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 RLFQ13129 1914 aa12.26□□□□□ -0.45
LRRC28-204ENST00000558172 IGF2BP3O00425 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
LRRC28-204ENST00000558172 CALM1P0DP23 149 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 CALM2P0DP24 149 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 CALM3P0DP25 149 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 CPA1P15085 419 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 SLC1A4P43007 532 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 DGKZQ13574 1117 aa12.25□□□□□ -0.45
LRRC28-204ENST00000558172 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
LRRC28-204ENST00000558172 ANKRD1Q15327 319 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms