RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MTIF3Q9H2K0 278 aaKnown RBP12.08□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 GRB10Q13322 594 aa12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TSR2Q969E8 191 aaKnown RBP12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 UMODL1Q5DID0 1318 aa12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
IGKV2D-28-202ENST00000558026 GDF11O95390 407 aa12.06□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ASNSP08243 561 aa12.06□□□□□ -0.48
IGKV2D-28-202ENST00000558026 UBE2ZQ9H832 354 aaPredicted RBP12.06□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TECTAO75443 2155 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MYADML2A6NDP7 307 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 LPXNO60711 386 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 KCNA5P22460 613 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 CDK7P50613 346 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 PTPN5P54829 565 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TCF15Q12870 199 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 KCNA10Q16322 511 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TMEM67Q5HYA8 995 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ERMP1Q7Z2K6 904 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 NUP133Q8WUM0 1156 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MFSD14AQ96MC6 490 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MOV10L1Q9BXT6 1211 aaKnown RBP12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 C9orf78Q9NZ63 289 aaPredicted RBP12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 SALL1Q9NSC2 1324 aa12.05□□□□□ -0.48
IGKV2D-28-202ENST00000558026 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 RGS20O76081 388 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 CCL23P55773 120 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TAP1Q03518 808 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 PTCRAQ6ISU1 281 aaPredicted RBP12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MROH7-TTC4A0A0A0MT08 1334 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 EPG5Q9HCE0 2579 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 CDK5RAP2Q96SN8 1893 aa12.04□□□□□ -0.48
IGKV2D-28-202ENST00000558026 BAHCC1Q9P281 2608 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 CACNA1HO95180 2353 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ERCC3P19447 782 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 PHKA1P46020 1223 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 LEXMQ3ZCV2 418 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ZNF384Q8TF68 577 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 VWCEQ96DN2 955 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 BICC1Q9H694 974 aaKnown RBP12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ABCF2Q9UG63 623 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 MROH7Q68CQ1 1323 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 SYNRGQ9UMZ2 1314 aa12.03□□□□□ -0.48
IGKV2D-28-202ENST00000558026 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.48
IGKV2D-28-202ENST00000558026 PLXNA3P51805 1871 aa12.02□□□□□ -0.48
IGKV2D-28-202ENST00000558026 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GPR75-ASB3A0A0A6YYF3 556 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 STRNO43815 780 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CCSAPQ6IQ19 270 aaPredicted RBP12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 KLHDC9Q8NEP7 349 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 LPIN2Q92539 896 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 VTI1AQ96AJ9 217 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GRXCR2A6NFK2 248 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ARVCFO00192 962 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 VCAM1P19320 739 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GDPD5Q8WTR4 605 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 GLT1D1Q96MS3 346 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 FEZ1Q99689 392 aa12.01□□□□□ -0.49
IGKV2D-28-202ENST00000558026 DENND2AQ9ULE3 1009 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms