RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 RFC4P35249 363 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 MTX1Q13505 466 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 AAMPQ13685 434 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 RABL6Q3YEC7 729 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 FAM89AQ96GI7 184 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 BICC1Q9H694 974 aaKnown RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 STK32BQ9NY57 414 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 DMGDHQ9UI17 866 aaKnown RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 ZNF646O15015 1829 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-218ENST00000557718 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
FOXN3-218ENST00000557718 CHD4Q14839 1912 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 FAM177BA6PVY3 158 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 POLRMTO00411 1230 aaKnown RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 RFX5P48382 616 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 HDAC1Q13547 482 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 CCINQ13939 588 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 PARP10Q53GL7 1025 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 ZMYM1Q5SVZ6 1142 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 SKAP1Q86WV1 359 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 CALR3Q96L12 384 aaKnown RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 PNMA5Q96PV4 448 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 PLA2G12BQ9BX93 195 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 C9orf78Q9NZ63 289 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
FOXN3-218ENST00000557718 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-218ENST00000557718 ARFGEF1Q9Y6D6 1849 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 A0A0A0MRY4 1105 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 DYRK3O43781 588 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 CSF1RP07333 972 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 HCLS1P14317 486 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-218ENST00000557718 NFKB1P19838 968 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 GRNP28799 593 aaKnown RBP7.41□□□□□ -1.22
FOXN3-218ENST00000557718 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 PSAPL1Q6NUJ1 521 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 PPP1R42Q7Z4L9 355 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
FOXN3-218ENST00000557718 ANKMY2Q8IV38 441 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 SSH3Q8TE77 659 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 UTP14AQ9BVJ6 771 aaKnown RBP7.41□□□□□ -1.22
FOXN3-218ENST00000557718 TRMT112Q9UI30 125 aaKnown RBP7.41□□□□□ -1.22
FOXN3-218ENST00000557718 NAGPAQ9UK23 515 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 SH3TC1Q8TE82 1336 aa7.41□□□□□ -1.22
FOXN3-218ENST00000557718 FAM196BA6NMK8 535 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 C9orf172C9J069 976 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L21D6R901 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 IRS4O14654 1257 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 ELNP15502 786 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 SELPP16109 830 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 AFF1P51825 1210 aaKnown RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 SLC10A5Q5PT55 438 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 LMBR1LQ6UX01 489 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 SLC51AQ86UW1 340 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 RPAP2Q8IXW5 612 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 SMC5Q8IY18 1101 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 TTLL11Q8NHH1 800 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 KLHDC4Q8TBB5 520 aa7.4□□□□□ -1.22
FOXN3-218ENST00000557718 CHMP4BQ9H444 224 aaKnown RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 PA2G4Q9UQ80 394 aaKnown RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-218ENST00000557718 DOCK2Q92608 1830 aa7.4□□□□□ -1.23
FOXN3-218ENST00000557718 FER1L6Q2WGJ9 1857 aa7.4□□□□□ -1.23
FOXN3-218ENST00000557718 PSME4Q14997 1843 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 C10orf71Q711Q0 1435 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 RTL9Q8NET4 1388 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 SRGAP3O43295 1099 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 PDE8AO60658 829 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 SERPINB2P05120 415 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 HMGB2P26583 209 aaKnown RBP7.39□□□□□ -1.23
FOXN3-218ENST00000557718 LMOD1P29536 600 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-218ENST00000557718 INPP5BP32019 993 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 CTSWP56202 376 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 RAC1P63000 192 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 PTPN12Q05209 780 aaKnown RBP7.39□□□□□ -1.23
FOXN3-218ENST00000557718 ADGRE1Q14246 886 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 R3HDM1Q15032 1099 aaKnown RBP7.39□□□□□ -1.23
FOXN3-218ENST00000557718 TMEM132AQ24JP5 1023 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 SETDB2Q96T68 719 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 GREM2Q9H772 168 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 DCTPP1Q9H773 170 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
FOXN3-218ENST00000557718 KLK14Q9P0G3 267 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms