RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 LILRA2Q8N149 483 aa4.91□□□□□ -1.62
FOXN3-216ENST00000557496 FAM161BQ96MY7 647 aa4.91□□□□□ -1.62
FOXN3-216ENST00000557496 SLC26A8Q96RN1 970 aa4.91□□□□□ -1.62
FOXN3-216ENST00000557496 C19orf44Q9H6X5 657 aa4.91□□□□□ -1.62
FOXN3-216ENST00000557496 REV1Q9UBZ9 1251 aa4.91□□□□□ -1.62
FOXN3-216ENST00000557496 POLR3KQ9Y2Y1 108 aaPredicted RBP4.91□□□□□ -1.62
FOXN3-216ENST00000557496 RBM47A0AV96 593 aaKnown RBP4.9□□□□□ -1.63
FOXN3-216ENST00000557496 FITM1A5D6W6 292 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 TCAF2A6NFQ2 919 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 DNAJA2O60884 412 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 NR0B2Q15466 257 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 IRF2BP1Q8IU81 584 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 OXR1Q8N573 874 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 KREMEN1Q96MU8 473 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 TMEM74Q96NL1 305 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 ASPNQ9BXN1 380 aa4.9□□□□□ -1.63
FOXN3-216ENST00000557496 SHISA3A0PJX4 238 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 CHURC1-FNTBB4DL54 471 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 GRIN3BO60391 1043 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 HTR3BO95264 441 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 TNNI2P48788 182 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 LINC00310P59036 64 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 XPCQ01831 940 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-216ENST00000557496 TEKQ02763 1124 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 BAHD1Q8TBE0 780 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-216ENST00000557496 DHX38Q92620 1227 aaKnown RBP4.89□□□□□ -1.63
FOXN3-216ENST00000557496 CCDC74BQ96LY2 380 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 SLC6A17Q9H1V8 727 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 CWC22Q9HCG8 908 aaKnown RBP4.89□□□□□ -1.63
FOXN3-216ENST00000557496 EBF1Q9UH73 591 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 KLHL3Q9UH77 587 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 RAPGEFL1Q9UHV5 662 aa4.89□□□□□ -1.63
FOXN3-216ENST00000557496 SMG5Q9UPR3 1016 aaKnown RBP4.89□□□□□ -1.63
FOXN3-216ENST00000557496 SORBS3O60504 671 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 MPP2Q14168 576 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 CIAPIN1Q6FI81 312 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 TTLL10Q6ZVT0 673 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 REC114Q7Z4M0 266 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 KCNN1Q92952 543 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 VWCEQ96DN2 955 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 INTS4Q96HW7 963 aaKnown RBP4.88□□□□□ -1.63
FOXN3-216ENST00000557496 RSRP1Q9BUV0 290 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 MCOLN1Q9GZU1 580 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 YBX2Q9Y2T7 364 aaKnown RBP4.88□□□□□ -1.63
FOXN3-216ENST00000557496 ZNF281Q9Y2X9 895 aa4.88□□□□□ -1.63
FOXN3-216ENST00000557496 MYOCOSA0A1B0GUC4 107 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 GARTP22102 1010 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 GBP2P32456 591 aaPredicted RBP4.87□□□□□ -1.63
FOXN3-216ENST00000557496 CHRNEQ04844 493 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 FAM160A1Q05DH4 1040 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 DUSP4Q13115 394 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 PWP1Q13610 501 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 LILRA6Q6PI73 481 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 PHACTR4Q8IZ21 702 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 ANKS4BQ8N8V4 417 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 GOLM1Q8NBJ4 401 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 SYTL4Q96C24 671 aaPredicted RBP4.87□□□□□ -1.63
FOXN3-216ENST00000557496 G6PC3Q9BUM1 346 aa4.87□□□□□ -1.63
FOXN3-216ENST00000557496 NUAK1O60285 661 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 PEX10O60683 326 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 SEMA7AO75326 666 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 TAGLNQ01995 201 aaKnown RBP4.86□□□□□ -1.63
FOXN3-216ENST00000557496 SNX17Q15036 470 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 SNAP47Q5SQN1 464 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 FAM196AQ6ZSG2 479 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 ZNF605Q86T29 641 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 SPPL2CQ8IUH8 684 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 RELL1Q8IUW5 271 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 FBXO27Q8NI29 283 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 SHISA4Q96DD7 197 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 KIF2CQ99661 725 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 HDAC8Q9BY41 377 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 VTI1BQ9UEU0 232 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 GPR160Q9UJ42 338 aa4.86□□□□□ -1.63
FOXN3-216ENST00000557496 NOTOA8MTQ0 251 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 RGS13O14921 159 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 PSPNO60542 156 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 UBOX5O94941 541 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 EFEMP2O95967 443 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 DLG4P78352 724 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 NMIQ13287 307 aaPredicted RBP4.85□□□□□ -1.63
FOXN3-216ENST00000557496 ERMP1Q7Z2K6 904 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 ENOX1Q8TC92 643 aaKnown RBP4.85□□□□□ -1.63
FOXN3-216ENST00000557496 SYTL5Q8TDW5 730 aaPredicted RBP4.85□□□□□ -1.63
FOXN3-216ENST00000557496 LRRC3Q9BY71 257 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 ZNF552Q9H707 407 aaPredicted RBP4.85□□□□□ -1.63
FOXN3-216ENST00000557496 MRS2Q9HD23 443 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 KCNQ5Q9NR82 932 aa4.85□□□□□ -1.63
FOXN3-216ENST00000557496 TEX51A0A1B0GUA7 166 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 MINDY4BA8MYZ0 360 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 INHBBP09529 407 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 GBP1P32455 592 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 RNF4P78317 190 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 CLEC16AQ2KHT3 1053 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 FBXL19Q6PCT2 694 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 RNF111Q6ZNA4 994 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 AEBP1Q8IUX7 1158 aa4.84□□□□□ -1.63
FOXN3-216ENST00000557496 GCM1Q9NP62 436 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms