RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DNAH12Q6ZR08 3092 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 PFASO15067 1338 aa7.26□□□□□ -1.25
VPS33B-207ENST00000557470 LOC285556D6RIA3 1793 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PEX10O60683 326 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 GCLCP48506 637 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 RHBDL3P58872 404 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 RRP1BQ14684 758 aaKnown RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 ZNF280CQ8ND82 737 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 ZNF384Q8TF68 577 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 SSH1Q8WYL5 1049 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PHOX2BQ99453 314 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 IRX2Q9BZI1 471 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 UBE2OQ9C0C9 1292 aaKnown RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 ASCC2Q9H1I8 757 aaPredicted RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 ABCF2Q9UG63 623 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PA2G4Q9UQ80 394 aaKnown RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PCDHB3Q9Y5E6 796 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 MROH7-TTC4A0A0A0MT08 1334 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PDS5AQ29RF7 1337 aaKnown RBP7.25□□□□□ -1.25
VPS33B-207ENST00000557470 ZNF521Q96K83 1311 aa7.25□□□□□ -1.25
VPS33B-207ENST00000557470 PLXNB2O15031 1838 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 VCANP13611 3396 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 GPR75-ASB3A0A0A6YYF3 556 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 CFHP08603 1231 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 CYP2B6P20813 491 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 IL15P40933 162 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-207ENST00000557470 MECOMQ03112 1051 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 MAP3K21Q5TCX8 1036 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 COL25A1Q9BXS0 654 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-207ENST00000557470 OSBPL5Q9H0X9 879 aaPredicted RBP7.24□□□□□ -1.25
VPS33B-207ENST00000557470 MORF4L1Q9UBU8 362 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 EYSQ5T1H1 3165 aa7.24□□□□□ -1.25
VPS33B-207ENST00000557470 SPTBN5Q9NRC6 3674 aaKnown RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 USP17L5A8MUK1 530 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 UBTFL1P0CB47 393 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 COL6A1P12109 1028 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 ZKSCAN1P17029 563 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 CAP2P40123 477 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 TIMM10P62072 90 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 IRX3P78415 501 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 PABPC4Q13310 644 aaKnown RBP eCLIP7.23□□□□□ -1.256e-11■■■■□ 25.6
VPS33B-207ENST00000557470 MTMR2Q13614 643 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 LRRC26Q2I0M4 334 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 SH3D19Q5HYK7 790 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 PARP9Q8IXQ6 854 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 GUCD1Q96NT3 240 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 TXNRD2Q9NNW7 524 aa7.23□□□□□ -1.25
VPS33B-207ENST00000557470 COL2A1P02458 1487 aaPredicted RBP7.23□□□□□ -1.25
VPS33B-207ENST00000557470 PRUNE2Q8WUY3 3088 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 ACTN4O43707 911 aaKnown RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 TLL1O43897 1013 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 XRCC5P13010 732 aaKnown RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 CCND3P30281 292 aaPredicted RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 HERVK_113P62684 666 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 JAG1P78504 1218 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 MDM2Q00987 491 aaPredicted RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 CCL14Q16627 93 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 AMHR2Q16671 573 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 SHROOM1Q2M3G4 852 aaPredicted RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 PI16Q6UXB8 463 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 TBC1D9Q6ZT07 1266 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 FAM9BQ8IZU0 186 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 GPRC5AQ8NFJ5 357 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 SOCS4Q8WXH5 440 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 USP6NLQ92738 828 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 NSUN4Q96CB9 384 aaKnown RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 P2RX7Q99572 595 aaKnown RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 NUDT12Q9BQG2 462 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 PRR14Q9BWN1 585 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.22□□□□□ -1.25
VPS33B-207ENST00000557470 ATAD5Q96QE3 1844 aa7.22□□□□□ -1.25
VPS33B-207ENST00000557470 A0A1B0GUL7 405 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 MAP4K4O95819 1239 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 MAPK4P31152 587 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 HOXA7P31268 230 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 BACE1P56817 501 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TFCP2Q12800 502 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 PDE3AQ14432 1141 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 MVPQ14764 893 aaKnown RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 KMT5BQ4FZB7 885 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 MORN1Q5T089 497 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 FAM109BQ6ICB4 259 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 GPR142Q7Z601 462 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TEX11Q8IYF3 940 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 TRMT44Q8IYL2 757 aaKnown RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 SPATA5Q8NB90 893 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 SH3RF3Q8TEJ3 882 aaPredicted RBP7.21□□□□□ -1.26
VPS33B-207ENST00000557470 FAM161BQ96MY7 647 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 APBA2Q99767 749 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 WDR18Q9BV38 432 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 PRKD2Q9BZL6 878 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 PORCNQ9H237 461 aa7.21□□□□□ -1.26
VPS33B-207ENST00000557470 DNAJC18Q9H819 358 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms