RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
NEDD1-211ENST00000557454 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
NEDD1-211ENST00000557454 CACNA1HO95180 2353 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 F6X3S4 739 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 COBLO75128 1261 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 KRT37O76014 449 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 CA3P07451 260 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 ASNSP08243 561 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 IL9P15248 144 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 CYP2C18P33260 490 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 PTPN5P54829 565 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 BEND3Q5T5X7 828 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 SUCLG2Q96I99 432 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
NEDD1-211ENST00000557454 TRIOO75962 3097 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 ACLYP53396 1101 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 RHBDL3P58872 404 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 DZIP1Q86YF9 867 aaKnown RBP11.78□□□□□ -0.52
NEDD1-211ENST00000557454 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
NEDD1-211ENST00000557454 NUP133Q8WUM0 1156 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 ARNTL2Q8WYA1 636 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 MFSD14AQ96MC6 490 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 SLC4A7Q9Y6M7 1214 aa11.78□□□□□ -0.52
NEDD1-211ENST00000557454 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ADAMTS4O75173 837 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ARHGEF15O94989 841 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 GDF11O95390 407 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 GRB10Q13322 594 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
NEDD1-211ENST00000557454 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
NEDD1-211ENST00000557454 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
NEDD1-211ENST00000557454 FAM86C1Q9NVL1 165 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.53
NEDD1-211ENST00000557454 MROH7Q68CQ1 1323 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 DMDP11532 3685 aa11.77□□□□□ -0.53
NEDD1-211ENST00000557454 ZNF236Q9UL36 1845 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 ATP2A2P16615 1042 aaKnown RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 IER5LQ5T953 404 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 MAML3Q96JK9 1138 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-211ENST00000557454 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 UMODL1Q5DID0 1318 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 ROBO3Q96MS0 1386 aa11.76□□□□□ -0.53
NEDD1-211ENST00000557454 RIF1Q5UIP0 2472 aaKnown RBP11.75□□□□□ -0.53
NEDD1-211ENST00000557454 LPXNO60711 386 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
NEDD1-211ENST00000557454 KCNA5P22460 613 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 CDK7P50613 346 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 TCF15Q12870 199 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
NEDD1-211ENST00000557454 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 CATSPERGQ6ZRH7 1159 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 LPIN2Q92539 896 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
NEDD1-211ENST00000557454 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 MYH2Q9UKX2 1941 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 SYNRGQ9UMZ2 1314 aa11.75□□□□□ -0.53
NEDD1-211ENST00000557454 MYADML2A6NDP7 307 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 STRNO43815 780 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 TAP1Q03518 808 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 KCNA10Q16322 511 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
NEDD1-211ENST00000557454 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 FAM126BQ8IXS8 530 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
NEDD1-211ENST00000557454 SLC5A4Q9NY91 659 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
NEDD1-211ENST00000557454 GPR75-ASB3A0A0A6YYF3 556 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 ZNF536O15090 1300 aa11.73□□□□□ -0.53
NEDD1-211ENST00000557454 TLR3O15455 904 aaKnown RBP11.73□□□□□ -0.53
NEDD1-211ENST00000557454 ELP1O95163 1332 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms