RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SLC27A2O14975 620 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 CFAP157Q5JU67 520 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 C2orf69Q8N8R5 385 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.29
NEK9-210ENST00000557026 MAGI3Q5TCQ9 1506 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.29
NEK9-210ENST00000557026 SYT1P21579 422 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 PAK1Q13153 545 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 CIAPIN1Q6FI81 312 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 ZNF365Q70YC5 407 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 METTL23Q86XA0 190 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 MAPKAPK5Q8IW41 473 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 MYCT1Q8N699 235 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 MASTLQ96GX5 879 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 FAM8A1Q9UBU6 413 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
NEK9-210ENST00000557026 SGSM2O43147 1006 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 SH3BP5O60239 455 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 DNA2P51530 1060 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 SP4Q02446 784 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 HERC4Q5GLZ8 1057 aaPredicted RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 RPS6KC1Q96S38 1066 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 KCNH3Q9ULD8 1083 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 IQCA1LA6NCM1 817 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 GAP43P17677 238 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ANO6Q4KMQ2 910 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 CCDC63Q8NA47 563 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 GNAT1P11488 350 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 HADHQ16836 314 aaKnown RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 PIK3AP1Q6ZUJ8 805 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 DPH6Q7L8W6 267 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 SUCLG2Q96I99 432 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 TIMM10P62072 90 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 DCUN1D2Q6PH85 259 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 CYP26C1Q6V0L0 522 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 PSTPIP2Q9H939 334 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 USP19O94966 1318 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ARHGAP31Q2M1Z3 1444 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 CRCPO75575 148 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ZNF189O75820 626 aaPredicted RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 CABP7Q86V35 215 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
NEK9-210ENST00000557026 PIM2Q9P1W9 311 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 LRFN2Q9ULH4 789 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
NEK9-210ENST00000557026 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 EIF3DO15371 548 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEK9-210ENST00000557026 ZNF174Q15697 407 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 TMTC1Q8IUR5 882 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 RUNDC3BQ96NL0 473 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 SKILP12757 684 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 CSGALNACT2Q8N6G5 542 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 AOPEPQ8N6M6 819 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 TXKP42681 527 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 GTF3C2Q8WUA4 911 aaPredicted RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 MYL1P05976 194 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 GBP1P32455 592 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 HSPA4P34932 840 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 IPO11Q9UI26 975 aaKnown RBP13.25□□□□□ -0.29
NEK9-210ENST00000557026 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
NEK9-210ENST00000557026 TYRO3Q06418 890 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 BCAP29Q9UHQ4 241 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 OATP04181 439 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 BTDP43251 543 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 ITIH3Q06033 890 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 RPGRIP1Q96KN7 1286 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 AK8Q96MA6 479 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
NEK9-210ENST00000557026 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
NEK9-210ENST00000557026 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 ERVK-7P63135 1459 aa13.24□□□□□ -0.29
NEK9-210ENST00000557026 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
NEK9-210ENST00000557026 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms