RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 TMEM57Q8N5G2 664 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 BCL2L13Q9BXK5 485 aa7.45□□□□□ -1.22
CPSF2-205ENST00000556622 RGPD2P0DJD1 1756 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 KIF4AO95239 1232 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
CPSF2-205ENST00000556622 MCCP23508 829 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 MCM4P33991 863 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 USP5P45974 858 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 CCT4P50991 539 aaKnown RBP7.44□□□□□ -1.22
CPSF2-205ENST00000556622 MFAP1P55081 439 aaKnown RBP7.44□□□□□ -1.22
CPSF2-205ENST00000556622 SIK1P57059 783 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 ARHGAP4P98171 946 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 R3HDM1Q15032 1099 aaKnown RBP7.44□□□□□ -1.22
CPSF2-205ENST00000556622 RABEP1Q15276 862 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 GRIK5Q16478 980 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 PLEKHO1Q53GL0 409 aaPredicted RBP7.44□□□□□ -1.22
CPSF2-205ENST00000556622 ANKRD45Q5TZF3 282 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 SULT6B1Q6IMI4 303 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 EDEM1Q92611 657 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 ABCC4O15439 1325 aa7.44□□□□□ -1.22
CPSF2-205ENST00000556622 PSAPP07602 524 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 SERPINB4P48594 390 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 TXNRD1Q16881 649 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 MPRIPQ6WCQ1 1025 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 IFNL2Q8IZJ0 200 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 GJD3Q8N144 294 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 STK31Q9BXU1 1019 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 SRCIN1Q9C0H9 1055 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 ELP3Q9H9T3 547 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 ABI2Q9NYB9 513 aaPredicted RBP7.43□□□□□ -1.22
CPSF2-205ENST00000556622 EP400Q96L91 3159 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 PCDH11XQ9BZA7 1347 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 PCDH11YQ9BZA8 1340 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 RGPD1P0DJD0 1748 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 PEAK1Q9H792 1746 aa7.43□□□□□ -1.22
CPSF2-205ENST00000556622 CYP27B1O15528 508 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 ABL1P00519 1130 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 GNAI3P08754 354 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 PCSK2P16519 638 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 EHHADHQ08426 723 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
CPSF2-205ENST00000556622 AMOTQ4VCS5 1084 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 PERM1Q5SV97 790 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 FBXO11Q86XK2 927 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 SLKQ9H2G2 1235 aaPredicted RBP7.42□□□□□ -1.22
CPSF2-205ENST00000556622 DCTPP1Q9H773 170 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 BCL9O00512 1426 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 TNS2Q63HR2 1409 aa7.42□□□□□ -1.22
CPSF2-205ENST00000556622 LRRC37A3O60309 1634 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 FAM208AQ9UK61 1670 aaKnown RBP7.41□□□□□ -1.22
CPSF2-205ENST00000556622 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 HMOX1P09601 288 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 GP2P55259 537 aaKnown RBP7.41□□□□□ -1.22
CPSF2-205ENST00000556622 DNM1Q05193 864 aaKnown RBP7.41□□□□□ -1.22
CPSF2-205ENST00000556622 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 TRIM44Q96DX7 344 aaPredicted RBP7.41□□□□□ -1.22
CPSF2-205ENST00000556622 ANO2Q9NQ90 1003 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 STK32BQ9NY57 414 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 MEGF6O75095 1541 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 SBF2Q86WG5 1849 aa7.41□□□□□ -1.22
CPSF2-205ENST00000556622 CHL1O00533 1208 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 RGS9O75916 674 aaPredicted RBP7.4□□□□□ -1.22
CPSF2-205ENST00000556622 PHKG2P15735 406 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 HSP90AB4PQ58FF6 505 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 C1orf141Q5JVX7 400 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
CPSF2-205ENST00000556622 CCDC30Q5VVM6 783 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 ZNF530Q6P9A1 599 aaPredicted RBP7.4□□□□□ -1.22
CPSF2-205ENST00000556622 CLEC17AQ6ZS10 378 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 ANKRD44Q8N8A2 993 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 PMEPA1Q969W9 287 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 LNPKQ9C0E8 428 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 SALL4Q9UJQ4 1053 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 IGSF1Q8N6C5 1336 aa7.4□□□□□ -1.22
CPSF2-205ENST00000556622 IBTKQ9P2D0 1353 aaPredicted RBP7.4□□□□□ -1.22
CPSF2-205ENST00000556622 WNK3Q9BYP7 1800 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 SOWAHDA6NJG2 315 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 CPB1P15086 417 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 HMGB2P26583 209 aaKnown RBP7.39□□□□□ -1.23
CPSF2-205ENST00000556622 CABP4P57796 275 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 KCNA1Q09470 495 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 COL13A1Q5TAT6 717 aaPredicted RBP7.39□□□□□ -1.23
CPSF2-205ENST00000556622 MSL1Q68DK7 614 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 PIGBQ92521 554 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
CPSF2-205ENST00000556622 TMOD3Q9NYL9 352 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 CNTN3Q9P232 1028 aa7.39□□□□□ -1.23
CPSF2-205ENST00000556622 AOX1Q06278 1338 aa7.38□□□□□ -1.23
CPSF2-205ENST00000556622 KIAA1324LA8MWY0 1029 aaPredicted RBP7.38□□□□□ -1.23
CPSF2-205ENST00000556622 ERVV-2B6SEH9 535 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms