RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SCN9AQ15858 1988 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 PFKFB1P16118 471 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 SDF4Q9BRK5 362 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 ADAMTS3O15072 1205 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 AKR1B1P15121 316 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 SPECC1Q5M775 1068 aa21.07■□□□□ 0.96
SDR39U1-220ENST00000556548 YDJCA8MPS7 323 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 PPP6R2O75170 966 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 ZBTB7AO95365 584 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 GABPAQ06546 454 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 PFKFB3Q16875 520 aaPredicted RBP21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 SLC35G1Q2M3R5 365 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 RILPL1Q5EBL4 403 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 SHC4Q6S5L8 630 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 ZDHHC15Q96MV8 337 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 SERPINB13Q9UIV8 391 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 UTRNP46939 3433 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 CMA1P23946 247 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 NT5C2P49902 561 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 NLRP5P59047 1200 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 USP17L2Q6R6M4 530 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 JMYQ8N9B5 988 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 DNAJC25Q9H1X3 360 aa21.06■□□□□ 0.96
SDR39U1-220ENST00000556548 NPY5RQ15761 445 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 LUZP1Q86V48 1076 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 PDLIM2Q96JY6 352 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 C10orf71Q711Q0 1435 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 QSER1Q2KHR3 1735 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 FAM196BA6NMK8 535 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 CYTH3O43739 400 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 ZNF202O95125 648 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 KCNA3P22001 575 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 GRIN1Q05586 938 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 UVSSAQ2YD98 709 aa21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 ZNF277Q9NRM2 450 aaPredicted RBP21.05■□□□□ 0.96
SDR39U1-220ENST00000556548 NAP1L5Q96NT1 182 aaPredicted RBP21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 BRMS1Q9HCU9 246 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 KLRF2D3W0D1 207 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 WNT7AO00755 349 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 CTAGE5O15320 804 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 LRRC47Q8N1G4 583 aaKnown RBP21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 FAM200AQ8TCP9 573 aa21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.04■□□□□ 0.96
SDR39U1-220ENST00000556548 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 MPHOSPH10O00566 681 aaKnown RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 RAD17O75943 681 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 ZSCAN29Q8IWY8 852 aaPredicted RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 CBX8Q9HC52 389 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 VAT1LQ9HCJ6 419 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 FOCADQ5VW36 1801 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 HLA-DOAP06340 250 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 TOP1P11387 765 aaKnown RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 SHMT1P34896 483 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 GNAQP50148 359 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 CCDC93Q567U6 631 aa21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 KRI1Q8N9T8 703 aaKnown RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
SDR39U1-220ENST00000556548 PARP1P09874 1014 aaKnown RBP21.02■□□□□ 0.96
SDR39U1-220ENST00000556548 SYKP43405 635 aa21.02■□□□□ 0.96
SDR39U1-220ENST00000556548 MTMR4Q9NYA4 1195 aa21.02■□□□□ 0.96
SDR39U1-220ENST00000556548 FAM198AQ9UFP1 575 aa21.02■□□□□ 0.96
SDR39U1-220ENST00000556548 DDTLA6NHG4 134 aaPredicted RBP21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 AP5Z1O43299 807 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 CUTAO60888 179 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 FKBP1AP62942 108 aaKnown RBP21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 ATP2B2Q01814 1243 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 TYW1BQ6NUM6 668 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 PIK3AP1Q6ZUJ8 805 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 KLHL34Q8N239 644 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 ADCY5O95622 1261 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 ZNF174Q15697 407 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 RESP18Q5W5W9 173 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 LARGE2Q8N3Y3 721 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 TNFRSF25Q93038 417 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 UBA5Q9GZZ9 404 aa21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 PPP1R1BQ9UD71 204 aaPredicted RBP21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 FBXO2Q9UK22 296 aaPredicted RBP21.01■□□□□ 0.95
SDR39U1-220ENST00000556548 TRIM75PA6NK02 468 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 ZNF165P49910 485 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 SHROOM1Q2M3G4 852 aaPredicted RBP21■□□□□ 0.95
SDR39U1-220ENST00000556548 CFAP100Q494V2 611 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 WWC2Q6AWC2 1192 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 C11orf57Q6ZUT1 292 aaPredicted RBP21■□□□□ 0.95
SDR39U1-220ENST00000556548 RASGRP4Q8TDF6 673 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 SERPINA10Q9UK55 444 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 MRIQ9BWK5 157 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 SWAP70Q9UH65 585 aa21■□□□□ 0.95
SDR39U1-220ENST00000556548 SH3BP5LQ7L8J4 393 aa20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 RTKN2Q8IZC4 609 aa20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 SLC16A10Q8TF71 515 aa20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 PRMT6Q96LA8 375 aaPredicted RBP20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 DNAJC18Q9H819 358 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms