RNA–Protein interactions for RNA: ENST00000556251.1

RAD51B-223, Transcript of RAD51 paralog B, human

TSL 4

Gene RAD51B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-223	ENST00000556251	CLMN	Q96JQ2	1002 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	TMEM39B	Q9GZU3	492 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	TMOD2	Q9NZR1	351 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	RAI14	Q9P0K7	980 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	DENND2A	Q9ULE3	1009 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	DDX19B	Q9UMR2	479 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	AKAP2	Q9Y2D5	859 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	RBM19	Q9Y4C8	960 aa	Known RBP	6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	FPGT-TNNI3K	V9GXZ4	949 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	ZNF609	O15014	1411 aa		6.66	□□□□□ -1.34
RAD51B-223	ENST00000556251	SFI1	A8K8P3	1242 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	SIAH2	O43255	324 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	SMARCA5	O60264	1052 aa	Predicted RBP	6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	FSHR	P23945	695 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	GRM5	P41594	1212 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	SCTR	P47872	440 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	IRX6	P78412	446 aa	Predicted RBP	6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	MTX1	Q13505	466 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	IFFO2	Q5TF58	517 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	MIGA2	Q7L4E1	593 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	ARMC9	Q7Z3E5	817 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	AACS	Q86V21	672 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	RASAL3	Q86YV0	1011 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	WDR66	Q8TBY9	1149 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	SSH3	Q8TE77	659 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	ZBED3	Q96IU2	234 aa	Predicted RBP	6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	ELP3	Q9H9T3	547 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	USP40	Q9NVE5	1235 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	HMG20B	Q9P0W2	317 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	LRP2BP	Q9P2M1	347 aa		6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	GNE	Q9Y223	722 aa	Known RBP	6.65	□□□□□ -1.34
RAD51B-223	ENST00000556251	PITPNM2	Q9BZ72	1349 aa		6.65	□□□□□ -1.35
RAD51B-223	ENST00000556251	PCNT	O95613	3336 aa		6.65	□□□□□ -1.35
RAD51B-223	ENST00000556251	MYH13	Q9UKX3	1938 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	TRPA1	O75762	1119 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	SLC19A1	P41440	591 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	MCAM	P43121	646 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	BTD	P43251	543 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	TNNI2	P48788	182 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	FKBP1A	P62942	108 aa	Known RBP	6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	ERVK-9	P63128	1117 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	DHX9	Q08211	1270 aa	Known RBP	6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	NFIA	Q12857	509 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	MMRN1	Q13201	1228 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	CCDC158	Q5M9N0	1113 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	CDC42EP5	Q6NZY7	148 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	TNS4	Q8IZW8	715 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	SPATA5	Q8NB90	893 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	EAF2	Q96CJ1	260 aa	Predicted RBP	6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	CRBN	Q96SW2	442 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	DNAJC2	Q99543	621 aa	Known RBP	6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	DAGLA	Q9Y4D2	1042 aa		6.64	□□□□□ -1.35
RAD51B-223	ENST00000556251	SSC5D	A1L4H1	1573 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	FAM155A	B1AL88	458 aa	Predicted RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	WNT7A	O00755	349 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	PPP1R12B	O60237	982 aa	Predicted RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	MAST3	O60307	1309 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	HMMR	O75330	724 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	HSPA8	P11142	646 aa	Known RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZAP70	P43403	619 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	CTCF	P49711	727 aa	Predicted RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	RRP1	P56182	461 aa	Known RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	MAP2K1	Q02750	393 aa	Predicted RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	MECOM	Q03112	1051 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	NOG	Q13253	232 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	TNFAIP1	Q13829	316 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZFPM1	Q8IX07	1006 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	SIRT2	Q8IXJ6	389 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	TMPRSS4	Q9NRS4	437 aa		6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	AATF	Q9NY61	560 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	DBNL	Q9UJU6	430 aa	Known RBP	6.63	□□□□□ -1.35
RAD51B-223	ENST00000556251	ARAP2	Q8WZ64	1704 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251		M0R2N6	131 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	USP2	O75604	605 aa	Predicted RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	IDH1	O75874	414 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	TBC1D8	O95759	1140 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ADH1C	P00326	375 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	IFIT2	P09913	472 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	UQCRFS1P1	P0C7P4	283 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ARID4A	P29374	1257 aa	Predicted RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	IREB2	P48200	963 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	RGS3	P49796	1198 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	DYNLL1	P63167	89 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	SUPT20HL1	Q3ZLR7	823 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	TSHZ3	Q63HK5	1081 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	CCDC84	Q86UT8	332 aa	Predicted RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	MIGA1	Q8NAN2	632 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	RHPN1	Q8TCX5	695 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZKSCAN4	Q969J2	545 aa	Predicted RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	EDC3	Q96F86	508 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	MRGPRX2	Q96LB1	330 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZDHHC15	Q96MV8	337 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	WRNIP1	Q96S55	665 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	OSBPL3	Q9H4L5	887 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ANTXR1	Q9H6X2	564 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	PIH1D3	Q9NQM4	214 aa	Known RBP	6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	ZBTB40	Q9NUA8	1239 aa		6.62	□□□□□ -1.35
RAD51B-223	ENST00000556251	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.62	□□□□□ -1.35

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