RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SHROOM1Q2M3G4 852 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 TMEM67Q5HYA8 995 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 SH3D19Q5HYK7 790 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 IFIT1BQ5T764 474 aaKnown RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 SYNE3Q6ZMZ3 975 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 GADL1Q6ZQY3 521 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 PRRT2Q7Z6L0 340 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 CCDC84Q86UT8 332 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 ACER1Q8TDN7 264 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 ANKS1AQ92625 1134 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 VCPKMTQ9H867 229 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 KAT14Q9H8E8 782 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 IL17RBQ9NRM6 502 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 TAF6LQ9Y6J9 622 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 TNKSO95271 1327 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 F5H6K3 240 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 NMT2O60551 498 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 ALDH1A1P00352 501 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 RPS6KB1P23443 525 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 GJA5P36382 358 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 NOVP48745 357 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 HMGCS2P54868 508 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 KIF23Q02241 960 aaPredicted RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 KLRC3Q07444 240 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 ZYXQ15942 572 aaKnown RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 ADCK5Q3MIX3 580 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 RUFY3Q7L099 469 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 CYB5R4Q7L1T6 521 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 CLEC10AQ8IUN9 316 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 ENAHQ8N8S7 591 aaPredicted RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 GMCL1P1Q8NEA9 526 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 C12orf42Q96LP6 360 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 TMEM47Q9BQJ4 181 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 BEGAINQ9BUH8 593 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 ZCCHC17Q9NP64 241 aaKnown RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.95□□□□□ -0.98
TDP1-214ENST00000556063 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 PHIPQ8WWQ0 1821 aa8.95□□□□□ -0.98
TDP1-214ENST00000556063 PTPRFP10586 1907 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 A0A1W2PRG0 241 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 CCDC69A6NI79 296 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 WDR46O15213 610 aaKnown RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 OSBPP22059 807 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 LIFRP42702 1097 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 SLC1A4P43007 532 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 TM4SF4P48230 202 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 ANTXR2P58335 489 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 IRX3P78415 501 aaPredicted RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 EXOSC10Q01780 885 aaKnown RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 ANKRD1Q15327 319 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 SEC23AQ15436 765 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 SLFN13Q68D06 897 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 RCSD1Q6JBY9 416 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 CHST3Q7LGC8 479 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 CATIPQ7Z7H3 387 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 SIAH1Q8IUQ4 282 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 LRRC47Q8N1G4 583 aaKnown RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 PNMA1Q8ND90 353 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 IGDCC4Q8TDY8 1250 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 IL17RAQ96F46 866 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 ISY1Q9ULR0 285 aaKnown RBP8.94□□□□□ -0.98
TDP1-214ENST00000556063 AGTPBP1Q9UPW5 1226 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 SLC45A1Q9Y2W3 748 aa8.94□□□□□ -0.98
TDP1-214ENST00000556063 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 SH2B2O14492 632 aaPredicted RBP8.93□□□□□ -0.98
TDP1-214ENST00000556063 AOC2O75106 756 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 DDAH1O94760 285 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 NDUFB10O96000 172 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 CALM1P0DP23 149 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 CALM2P0DP24 149 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 CALM3P0DP25 149 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 VCAM1P19320 739 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 KIF5BP33176 963 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 RABEP1Q15276 862 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 CCDC96Q2M329 555 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 IFNL1Q8IU54 200 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 FBXL16Q8N461 479 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 CHURC1Q8WUH1 139 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 DCAF4Q8WV16 495 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 GMCL1Q96IK5 515 aa8.93□□□□□ -0.98
TDP1-214ENST00000556063 TBC1D32Q96NH3 1257 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms