RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 INTS4Q96HW7 963 aaKnown RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 SEC62Q99442 399 aaKnown RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ADPGKQ9BRR6 497 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 UAP1Q16222 522 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ZNF569Q5MCW4 686 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 NSMCE1Q8WV22 266 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 KDM5CP41229 1560 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 TNKSO95271 1327 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PDE8BO95263 885 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 LIG4P49917 911 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CALCOCO2Q13137 446 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 VWA3BQ502W6 1294 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 BRINP3Q76B58 766 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 MIGA2Q7L4E1 593 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PLA2G4DQ86XP0 818 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 BLZF1Q9H2G9 400 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ST7Q9NRC1 585 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CFAP74Q9C0B2 1584 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 SEMA3EO15041 775 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CUTAO60888 179 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 P4HA1P13674 534 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ADORA1P30542 326 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 MICALCLQ6ZW33 695 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 IFT81Q8WYA0 676 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ZHX1Q9UKY1 873 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 CFAP65Q6ZU64 1925 aaKnown RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PRAMEF22A3QJZ6 481 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PAK1Q13153 545 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 C6orf163Q5TEZ5 329 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 ABI1Q8IZP0 508 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 EAF2Q96CJ1 260 aaPredicted RBP9.14□□□□□ -0.95
SYNE2-220ENST00000555612 SELENOSQ9BQE4 189 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 USP44Q9H0E7 712 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 SYNRGQ9UMZ2 1314 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 PALLDQ8WX93 1383 aa9.14□□□□□ -0.95
SYNE2-220ENST00000555612 IREB2P48200 963 aaKnown RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 CYP2J2P51589 502 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 USP14P54578 494 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 MMS19Q96T76 1030 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 TEKT3Q9BXF9 490 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 TMOD1P28289 359 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 ERCC5P28715 1186 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 CCDC122Q5T0U0 273 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 BEND3Q5T5X7 828 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 SEPT14Q6ZU15 432 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 CNGA4Q8IV77 575 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 SLC10A4Q96EP9 437 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 GPR101Q96P66 508 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 ROBO2Q9HCK4 1378 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 STK10O94804 968 aaKnown RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 PSMC4P43686 418 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 IRX5P78411 483 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 JAKMIP2Q96AA8 810 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 NT5C3AQ9H0P0 336 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 TSPOAP1O95153 1857 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 ARHGAP44Q17R89 818 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 GEN1Q17RS7 908 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 FAM160B1Q5W0V3 765 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 PIGBQ92521 554 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 CTTNBP2NLQ9P2B4 639 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 JAK2O60674 1132 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 XRCC6P12956 609 aaKnown RBP eCLIP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 NPR1P16066 1061 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 POLGP54098 1239 aaPredicted RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 RTKN2Q8IZC4 609 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 ZBTB9Q96C00 473 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 NRBP2Q9NSY0 501 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 PCDHA1Q9Y5I3 950 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 TECP42680 631 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 BLIDQ8IZY5 108 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 MTRF1LQ9UGC7 380 aaKnown RBP9.13□□□□□ -0.95
SYNE2-220ENST00000555612 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 CD2APQ9Y5K6 639 aa9.13□□□□□ -0.95
SYNE2-220ENST00000555612 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 LRRIQ4A6NIV6 560 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 CRCPO75575 148 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 IGSF22Q8N9C0 903 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 MRRFQ96E11 262 aaKnown RBP9.12□□□□□ -0.95
SYNE2-220ENST00000555612 AKR1B15C9JRZ8 316 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-220ENST00000555612 K7ENM7 598 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 CBX1P83916 185 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.12□□□□□ -0.95
SYNE2-220ENST00000555612 RTEL1Q9NZ71 1219 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 PNMA2Q9UL42 364 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-220ENST00000555612 FMNL1O95466 1100 aaPredicted RBP9.12□□□□□ -0.95
SYNE2-220ENST00000555612 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 FBF1Q8TES7 1133 aa9.12□□□□□ -0.95
SYNE2-220ENST00000555612 STIM2Q9P246 746 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms