RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SLC6A19Q695T7 634 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 MCATQ8IVS2 390 aaKnown RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 PANK1Q8TE04 598 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 DACT3Q96B18 629 aaPredicted RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 ACSF2Q96CM8 615 aaPredicted RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 TMEM87BQ96K49 555 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 DPH2Q9BQC3 489 aaPredicted RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 GPR62Q9BZJ7 368 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 FITM1A5D6W6 292 aa7.15□□□□□ -1.26
SNX6-204ENST00000555541 NOTOA8MTQ0 251 aa7.15□□□□□ -1.26
SNX6-204ENST00000555541 PRPF40AO75400 957 aaKnown RBP7.15□□□□□ -1.26
SNX6-204ENST00000555541 EFEMP2O95967 443 aa7.15□□□□□ -1.26
SNX6-204ENST00000555541 EPB41L4AQ9HCS5 686 aaPredicted RBP7.15□□□□□ -1.26
SNX6-204ENST00000555541 ZNF281Q9Y2X9 895 aa7.15□□□□□ -1.26
SNX6-204ENST00000555541 PGRP06401 933 aa7.14□□□□□ -1.27
SNX6-204ENST00000555541 MEI1Q5TIA1 1274 aa7.14□□□□□ -1.27
SNX6-204ENST00000555541 TSPYL5Q86VY4 417 aaPredicted RBP7.14□□□□□ -1.27
SNX6-204ENST00000555541 TMEM151BQ8IW70 566 aa7.14□□□□□ -1.27
SNX6-204ENST00000555541 CEP131Q9UPN4 1083 aa7.14□□□□□ -1.27
SNX6-204ENST00000555541 EGR3Q06889 387 aa7.13□□□□□ -1.27
SNX6-204ENST00000555541 MAP3K11Q16584 847 aa7.13□□□□□ -1.27
SNX6-204ENST00000555541 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
SNX6-204ENST00000555541 OXR1Q8N573 874 aa7.13□□□□□ -1.27
SNX6-204ENST00000555541 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
SNX6-204ENST00000555541 MBD1Q9UIS9 605 aaPredicted RBP7.13□□□□□ -1.27
SNX6-204ENST00000555541 ADAM30Q9UKF2 790 aa7.13□□□□□ -1.27
SNX6-204ENST00000555541 UPK3BL1B0FP48 263 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 UPK3BL2E5RIL1 263 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 ADRB1P08588 477 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 PI3P19957 117 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 RPL6Q02878 288 aaKnown RBP7.12□□□□□ -1.27
SNX6-204ENST00000555541 SNX17Q15036 470 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 DUSP13Q9UII6 198 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 TLR6Q9Y2C9 796 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 CORINQ9Y5Q5 1042 aa7.12□□□□□ -1.27
SNX6-204ENST00000555541 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
SNX6-204ENST00000555541 LINC01599Q8WXQ3 324 aa7.11□□□□□ -1.27
SNX6-204ENST00000555541 G6PC3Q9BUM1 346 aa7.11□□□□□ -1.27
SNX6-204ENST00000555541 MIR1-1HGQ9H1L0 117 aa7.11□□□□□ -1.27
SNX6-204ENST00000555541 PCDHA11Q9Y5I1 949 aa7.11□□□□□ -1.27
SNX6-204ENST00000555541 FAM221AA4D161 298 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 SLC22A31A6NKX4 558 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 RFXAPO00287 272 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 CELA3BP08861 270 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 CTSHP09668 335 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 EFEMP1Q12805 493 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 DTWD2Q8NBA8 298 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 PHC3Q8NDX5 983 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 FEZF2Q8TBJ5 459 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 SIGLEC10Q96LC7 697 aa7.1□□□□□ -1.27
SNX6-204ENST00000555541 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
SNX6-204ENST00000555541 HRKO00198 91 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 PSPNO60542 156 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 LRRN2O75325 713 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 ETV3P41162 512 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 TMEM201Q5SNT2 666 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 JARID2Q92833 1246 aaPredicted RBP7.09□□□□□ -1.27
SNX6-204ENST00000555541 TMPRSS5Q9H3S3 457 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 TIMELESSQ9UNS1 1208 aa7.09□□□□□ -1.27
SNX6-204ENST00000555541 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 IRS4O14654 1257 aaPredicted RBP7.08□□□□□ -1.28
SNX6-204ENST00000555541 CILPO75339 1184 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 GALK1P51570 392 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 EPHB3P54753 998 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 DAB2P98082 770 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 TEKQ02763 1124 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 PDE4BQ07343 736 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 NLRX1Q86UT6 975 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 DHX38Q92620 1227 aaKnown RBP7.08□□□□□ -1.28
SNX6-204ENST00000555541 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
SNX6-204ENST00000555541 TRAIPQ9BWF2 469 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 GPATCH2Q9NW75 528 aa7.08□□□□□ -1.28
SNX6-204ENST00000555541 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
SNX6-204ENST00000555541 ANKRD33BA6NCL7 494 aa7.07□□□□□ -1.28
SNX6-204ENST00000555541 SASH1O94885 1247 aa7.07□□□□□ -1.28
SNX6-204ENST00000555541 PDE6BP35913 854 aa7.07□□□□□ -1.28
SNX6-204ENST00000555541 ST13P50502 369 aaKnown RBP7.07□□□□□ -1.28
SNX6-204ENST00000555541 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
SNX6-204ENST00000555541 BNC2Q6ZN30 1099 aaPredicted RBP7.07□□□□□ -1.28
SNX6-204ENST00000555541 CCDC84Q86UT8 332 aaPredicted RBP7.07□□□□□ -1.28
SNX6-204ENST00000555541 CYB5D2Q8WUJ1 264 aa7.07□□□□□ -1.28
SNX6-204ENST00000555541 CHRNEQ04844 493 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
SNX6-204ENST00000555541 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 VWCEQ96DN2 955 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 CNTD2Q9H8S5 307 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 PARP2Q9UGN5 583 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
SNX6-204ENST00000555541 LMNB1P20700 586 aa7.05□□□□□ -1.28
SNX6-204ENST00000555541 EAPPQ56P03 285 aaPredicted RBP7.05□□□□□ -1.28
SNX6-204ENST00000555541 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
SNX6-204ENST00000555541 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
SNX6-204ENST00000555541 TEPSINQ96N21 525 aa7.05□□□□□ -1.28
SNX6-204ENST00000555541 IRAK3Q9Y616 596 aa7.05□□□□□ -1.28
SNX6-204ENST00000555541 RBM47A0AV96 593 aaKnown RBP7.04□□□□□ -1.28
SNX6-204ENST00000555541 N4BP3O15049 544 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 DNAJA2O60884 412 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 RLBP1P12271 317 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms