RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 TMTC2Q8N394 836 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 ENAHQ8N8S7 591 aaPredicted RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
CHD8-208ENST00000555301 LPAR1Q92633 364 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 C12orf42Q96LP6 360 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 VCPKMTQ9H867 229 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 GOPCQ9HD26 462 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
CHD8-208ENST00000555301 RPS6KB1P23443 525 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 EXOSC10Q01780 885 aaKnown RBP16.77■□□□□ 0.28
CHD8-208ENST00000555301 SEC23AQ15436 765 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 ZYXQ15942 572 aaKnown RBP16.77■□□□□ 0.28
CHD8-208ENST00000555301 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 GMCL1P1Q8NEA9 526 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
CHD8-208ENST00000555301 F5H6K3 240 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 AOC2O75106 756 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 LIFRP42702 1097 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 KLRC3Q07444 240 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 GADL1Q6ZQY3 521 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
CHD8-208ENST00000555301 BRI3BPQ8WY22 251 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 EMILIN3Q9NT22 766 aa16.76■□□□□ 0.27
CHD8-208ENST00000555301 GREB1LQ9C091 1923 aaPredicted RBP16.75■□□□□ 0.27
CHD8-208ENST00000555301 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
CHD8-208ENST00000555301 RAD21O60216 631 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 TM4SF4P48230 202 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 FGD1P98174 961 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHD8-208ENST00000555301 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CHD8-208ENST00000555301 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
CHD8-208ENST00000555301 WDR46O15213 610 aaKnown RBP16.74■□□□□ 0.27
CHD8-208ENST00000555301 NDUFB10O96000 172 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 CPA1P15085 419 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 MOGSQ13724 837 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
CHD8-208ENST00000555301 LY9Q9HBG7 655 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
CHD8-208ENST00000555301 SLC45A1Q9Y2W3 748 aa16.74■□□□□ 0.27
CHD8-208ENST00000555301 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 MYH8P13535 1937 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 VCAM1P19320 739 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 DGKZQ13574 1117 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 Q6ZUG5 572 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 CATIPQ7Z7H3 387 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 TCEANC2Q96MN5 208 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
CHD8-208ENST00000555301 USP17L15C9J2P7 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L13C9JLJ4 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L11C9JVI0 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L18D6R9N7 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L22D6RA61 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L17D6RBQ6 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L19D6RCP7 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L20D6RJB6 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
CHD8-208ENST00000555301 SLC1A4P43007 532 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 USP17L24Q0WX57 530 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 GPAT2Q6NUI2 795 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 PTPN18Q99952 460 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
CHD8-208ENST00000555301 PDHXO00330 501 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHD8-208ENST00000555301 BMP3P12645 472 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 OSBPP22059 807 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 KIAA1755Q5JYT7 1200 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 SYNE3Q6ZMZ3 975 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 KIF2CQ99661 725 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 ALDH8A1Q9H2A2 487 aaPredicted RBP16.71■□□□□ 0.27
CHD8-208ENST00000555301 RPAP3Q9H6T3 665 aaPredicted RBP16.71■□□□□ 0.27
CHD8-208ENST00000555301 SENP2Q9HC62 589 aa16.71■□□□□ 0.27
CHD8-208ENST00000555301 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
CHD8-208ENST00000555301 SLC12A7Q9Y666 1083 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms