RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 ZBTB48P10074 688 aaPredicted RBP20.58■□□□□ 0.89
PSEN1-212ENST00000555254 PDIA4P13667 645 aaKnown RBP20.58■□□□□ 0.89
PSEN1-212ENST00000555254 CCT2P78371 535 aaKnown RBP20.58■□□□□ 0.89
PSEN1-212ENST00000555254 MAP3K10Q02779 954 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 EVX2Q03828 476 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 CATIPQ7Z7H3 387 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 REM2Q8IYK8 340 aaPredicted RBP20.58■□□□□ 0.89
PSEN1-212ENST00000555254 BRPF3Q9ULD4 1205 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 MANSC4A6NHS7 340 aaPredicted RBP20.57■□□□□ 0.88
PSEN1-212ENST00000555254 TBC1D12O60347 775 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 TRPA1O75762 1119 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 RASA1P20936 1047 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 METAP2P50579 478 aaKnown RBP eCLIP20.57■□□□□ 0.88
PSEN1-212ENST00000555254 SREBF2Q12772 1141 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 ERO1BQ86YB8 467 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 NAV1Q8NEY1 1877 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 TCP11L1Q9NUJ3 509 aa20.57■□□□□ 0.88
PSEN1-212ENST00000555254 CCDC196A0A1B0GTZ2 297 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 SPDYE5A6NIY4 337 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 CALM1P0DP23 149 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 CALM2P0DP24 149 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 CALM3P0DP25 149 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 PDCP20941 246 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 DDIT3P35638 169 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 SCRN1Q12765 414 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 APOA5Q6Q788 366 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 SLC44A5Q8NCS7 719 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 NKX2-3Q8TAU0 364 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 CCDC17Q96LX7 622 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 RNF186Q9NXI6 227 aa20.56■□□□□ 0.88
PSEN1-212ENST00000555254 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
PSEN1-212ENST00000555254 GOLGA8AA7E2F4 631 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
PSEN1-212ENST00000555254 CDKL5O76039 1030 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 GJB2P29033 226 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 TM4SF4P48230 202 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 RCAN1P53805 252 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 HMGN5P82970 282 aaKnown RBP20.55■□□□□ 0.88
PSEN1-212ENST00000555254 GABPAQ06546 454 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 PPP2R5BQ15173 497 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 SEC23AQ15436 765 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
PSEN1-212ENST00000555254 DGKHQ86XP1 1220 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 ENAHQ8N8S7 591 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-212ENST00000555254 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 NEDD1Q8NHV4 660 aa20.55■□□□□ 0.88
PSEN1-212ENST00000555254 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-212ENST00000555254 CA12O43570 354 aa20.54■□□□□ 0.88
PSEN1-212ENST00000555254 MICU3Q86XE3 530 aa20.54■□□□□ 0.88
PSEN1-212ENST00000555254 KAT14Q9H8E8 782 aa20.54■□□□□ 0.88
PSEN1-212ENST00000555254 LAMB1P07942 1786 aa20.54■□□□□ 0.88
PSEN1-212ENST00000555254 IRF6O14896 467 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 GTF2A2P52657 109 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 INHBEP58166 350 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 PPATQ06203 517 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 PPIL2Q13356 520 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 NUP133Q8WUM0 1156 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 ANKS1AQ92625 1134 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 NCOA5Q9HCD5 579 aaKnown RBP20.53■□□□□ 0.88
PSEN1-212ENST00000555254 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-212ENST00000555254 ZHX2Q9Y6X8 837 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 THSD7BQ9C0I4 1608 aa20.53■□□□□ 0.88
PSEN1-212ENST00000555254 CCL15-CCL14A0A0B4J2E2 113 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 PTPRAP18433 802 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 ST3GAL1Q11201 340 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 RRP1BQ14684 758 aaKnown RBP20.52■□□□□ 0.88
PSEN1-212ENST00000555254 CCL15Q16663 113 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 RTN1Q16799 776 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-212ENST00000555254 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 SENP2Q9HC62 589 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 HPS5Q9UPZ3 1129 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 MYH1P12882 1939 aa20.52■□□□□ 0.88
PSEN1-212ENST00000555254 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
PSEN1-212ENST00000555254 DDAH1O94760 285 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 CAP2P40123 477 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 CERKLQ49MI3 558 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-212ENST00000555254 LARP1BQ659C4 914 aaKnown RBP20.51■□□□□ 0.87
PSEN1-212ENST00000555254 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
PSEN1-212ENST00000555254 IFNL1Q8IU54 200 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 DNAJC18Q9H819 358 aa20.51■□□□□ 0.87
PSEN1-212ENST00000555254 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 NMT2O60551 498 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 GDF11O95390 407 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 CETPP11597 493 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 SHMT1P34896 483 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 NSUN7Q8NE18 718 aaKnown RBP20.5■□□□□ 0.87
PSEN1-212ENST00000555254 CTCFLQ8NI51 663 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-212ENST00000555254 BRI3BPQ8WY22 251 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 PTPN18Q99952 460 aa20.5■□□□□ 0.87
PSEN1-212ENST00000555254 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms