RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
PABPN1-204ENST00000554062 TMEM130Q8N3G9 435 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 NEDD1Q8NHV4 660 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 ISL2Q96A47 359 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 KLHL25Q9H0H3 589 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 NCOA5Q9HCD5 579 aaKnown RBP6.43□□□□□ -1.38
PABPN1-204ENST00000554062 KCNK4Q9NYG8 393 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 MAPRE3Q9UPY8 281 aa6.43□□□□□ -1.38
PABPN1-204ENST00000554062 A0A1W2PQU0 124 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 ALG1L2C9J202 215 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 MARCH6O60337 910 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 HCLS1P14317 486 aaPredicted RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 CYP7A1P22680 504 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 PMLP29590 882 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 STAT3P40763 770 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 AMPD3Q01432 767 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 KRT76Q01546 638 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 PABPC4Q13310 644 aaKnown RBP eCLIP6.42□□□□□ -1.387e-6■■□□□ 12
PABPN1-204ENST00000554062 NBPF12Q5TAG4 269 aaPredicted RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 ARMCX6Q7L4S7 300 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 PRPF38AQ8NAV1 312 aaKnown RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 BVESQ8NE79 360 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 RCC1LQ96I51 464 aaKnown RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 FBRSQ9HAH7 460 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 ARHGEF4Q9NR80 690 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 DDX56Q9NY93 547 aaKnown RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 SUGT1Q9Y2Z0 365 aa6.42□□□□□ -1.38
PABPN1-204ENST00000554062 MRPS23Q9Y3D9 190 aaKnown RBP6.42□□□□□ -1.38
PABPN1-204ENST00000554062 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
PABPN1-204ENST00000554062 GAS2O43903 313 aaKnown RBP6.41□□□□□ -1.38
PABPN1-204ENST00000554062 EFCAB14O75071 495 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 NEFMP07197 916 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 NOL8Q76FK4 1167 aaKnown RBP6.41□□□□□ -1.38
PABPN1-204ENST00000554062 ADAT2Q7Z6V5 191 aaKnown RBP6.41□□□□□ -1.38
PABPN1-204ENST00000554062 PPFIBP1Q86W92 1011 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 ZNF227Q86WZ6 799 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 PPM1KQ8N3J5 372 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 GIMAP7Q8NHV1 300 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 RNF141Q8WVD5 230 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 KISS1RQ969F8 398 aaPredicted RBP6.41□□□□□ -1.38
PABPN1-204ENST00000554062 PPP1R14AQ96A00 147 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 NACC1Q96RE7 527 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 IRF2BPLQ9H1B7 796 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 SFMBT1Q9UHJ3 866 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 MKL2Q9ULH7 1088 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 PCDHB12Q9Y5F1 795 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
PABPN1-204ENST00000554062 TP53P04637 393 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 MYCLP1P12525 358 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 NAT1P18440 290 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 PPP2R2AP63151 447 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 GRB10Q13322 594 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 NKG7Q16617 165 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 UVSSAQ2YD98 709 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 NBPF9Q3BBW0 867 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 HSP90AB2PQ58FF8 381 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 AXDND1Q5T1B0 1012 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 TDRD10Q5VZ19 366 aaKnown RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 AHI1Q8N157 1196 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 LRRN4CLQ8ND94 238 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 BAHD1Q8TBE0 780 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 CCDC136Q96JN2 1154 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 DPH2Q9BQC3 489 aaPredicted RBP6.4□□□□□ -1.38
PABPN1-204ENST00000554062 HOMER2Q9NSB8 354 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 ACTL7BQ9Y614 415 aa6.4□□□□□ -1.38
PABPN1-204ENST00000554062 CBFA2T2O43439 604 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 NPTXRO95502 500 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 ITGAVP06756 1048 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 CD247P20963 164 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 FLT3P36888 993 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 USP11P51784 963 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 GABREP78334 506 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 NRG1Q02297 640 aaPredicted RBP6.39□□□□□ -1.39
PABPN1-204ENST00000554062 AUHQ13825 339 aaKnown RBP6.39□□□□□ -1.39
PABPN1-204ENST00000554062 PLEKHG6Q3KR16 790 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 TRIM61Q5EBN2 209 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 NSMFQ6X4W1 530 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 PODNQ7Z5L7 613 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 THNSL2Q86YJ6 484 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 RPUSD2Q8IZ73 545 aaKnown RBP6.39□□□□□ -1.39
PABPN1-204ENST00000554062 FBXL18Q96ME1 805 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 SUSD2Q9UGT4 822 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 DIS3Q9Y2L1 958 aaKnown RBP6.39□□□□□ -1.39
PABPN1-204ENST00000554062 ATP8A1Q9Y2Q0 1164 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 FHOD1Q9Y613 1164 aa6.39□□□□□ -1.39
PABPN1-204ENST00000554062 KCNQ2O43526 872 aa6.38□□□□□ -1.39
PABPN1-204ENST00000554062 PDE8AO60658 829 aa6.38□□□□□ -1.39
PABPN1-204ENST00000554062 WISP1O95388 367 aa6.38□□□□□ -1.39
PABPN1-204ENST00000554062 PDGFRBP09619 1106 aa6.38□□□□□ -1.39
PABPN1-204ENST00000554062 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
PABPN1-204ENST00000554062 EXOSC10Q01780 885 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms