RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 SCRN1Q12765 414 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 RTN1Q16799 776 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-206ENST00000553830 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 ANKS1AQ92625 1134 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-206ENST00000553830 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
PRKCH-206ENST00000553830 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-206ENST00000553830 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 HPS5Q9UPZ3 1129 aa16.49■□□□□ 0.23
PRKCH-206ENST00000553830 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-206ENST00000553830 USP17L5A8MUK1 530 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 PFKFB2O60825 505 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 DDAH1O94760 285 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-206ENST00000553830 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
PRKCH-206ENST00000553830 PTPRFP10586 1907 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 CPLX1O14810 134 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
PRKCH-206ENST00000553830 PTPRAP18433 802 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 CDC27P30260 824 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
PRKCH-206ENST00000553830 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 SMC1BQ8NDV3 1235 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
PRKCH-206ENST00000553830 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
PRKCH-206ENST00000553830 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 CALM1P0DP23 149 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 CALM2P0DP24 149 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 CALM3P0DP25 149 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 EVCP57679 992 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 DGKZQ13574 1117 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 CMTR1Q8N1G2 835 aaKnown RBP16.46■□□□□ 0.23
PRKCH-206ENST00000553830 CCDC82Q8N4S0 544 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 GINM1Q9NU53 330 aa16.46■□□□□ 0.23
PRKCH-206ENST00000553830 PLEKHA8P1O95397 391 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
PRKCH-206ENST00000553830 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
PRKCH-206ENST00000553830 NOVP48745 357 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 TROAPQ12815 778 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 SPP2Q13103 211 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 MTMR2Q13614 643 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 GRM4Q14833 912 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
PRKCH-206ENST00000553830 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
PRKCH-206ENST00000553830 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
PRKCH-206ENST00000553830 F5H6K3 240 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 JAK2O60674 1132 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 NDUFB10O96000 172 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 PDHBP11177 359 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 FOSBP53539 338 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 KLRC3Q07444 240 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 CUL4AQ13619 759 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 KIAA1755Q5JYT7 1200 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 CST9Q5W186 159 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 STAG2Q8N3U4 1231 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 ZNF280CQ8ND82 737 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 MKL1Q969V6 931 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
PRKCH-206ENST00000553830 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
PRKCH-206ENST00000553830 TOMM70O94826 608 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 KIF5BP33176 963 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 SLC1A4P43007 532 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
PRKCH-206ENST00000553830 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
PRKCH-206ENST00000553830 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
PRKCH-206ENST00000553830 PHKBQ93100 1093 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 OPTNQ96CV9 577 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
PRKCH-206ENST00000553830 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
PRKCH-206ENST00000553830 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
PRKCH-206ENST00000553830 DHX16O60231 1041 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms