RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 RBL2Q08999 1139 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 IL17AQ16552 155 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 ERFEQ4G0M1 354 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 TEX35Q5T0J7 233 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 IFIT1BQ5T764 474 aaKnown RBP7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 TMTC3Q6ZXV5 915 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 SLC51AQ86UW1 340 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 TMTC2Q8N394 836 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 CPLX3Q8WVH0 158 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 MTRQ99707 1265 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 ADD3Q9UEY8 706 aaKnown RBP7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
LINC-ROR-201ENST00000553704 LOC102724428A0A0B4J2F2 783 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 EFCAB8A8MWE9 144 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 PRPF3O43395 683 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 NPM3O75607 178 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 SIK1P57059 783 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 AKAP17AQ02040 695 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 E2F4Q16254 413 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 SLC4A8Q2Y0W8 1093 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 PARP10Q53GL7 1025 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 FAM47AQ5JRC9 791 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 TTC38Q5R3I4 469 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 SRBD1Q8N5C6 995 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 LZTFL1Q9NQ48 299 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 SBF2Q86WG5 1849 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 AKR1B15C9JRZ8 316 aaPredicted RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 RNF225M0QZC1 329 aaPredicted RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 MFAP3LO75121 409 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 ABL1P00519 1130 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 GYPCP04921 128 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 CDC25AP30304 524 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 CCT6AP40227 531 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 FXR1P51114 621 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 PTGDRQ13258 359 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 BMS1Q14692 1282 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 SPATA1Q5VX52 437 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 RSRC2Q7L4I2 434 aaKnown RBP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 CATIPQ7Z7H3 387 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 FAM205AQ6ZU69 1335 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 MYH1P12882 1939 aa7.88□□□□□ -1.15
LINC-ROR-201ENST00000553704 USP17L12C9JPN9 530 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 USP17L21D6R901 530 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 TBC1D8O95759 1140 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 CASP14P31944 242 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 KCNQ4P56696 695 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 ATP2C1P98194 919 aaPredicted RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 TMCO3Q6UWJ1 677 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 MARCH10Q8NA82 808 aaPredicted RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 CCDC12Q8WUD4 166 aaPredicted RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 CELF1Q92879 486 aaKnown RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 PANX2Q96RD6 677 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 BRIP1Q9BX63 1249 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 SRRTQ9BXP5 876 aaKnown RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 ZSWIM4Q9H7M6 989 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 JAG2Q9Y219 1238 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 ADGRG1Q9Y653 693 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 ERICH4A6NGS2 130 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 CC2D1AQ6P1N0 951 aaPredicted RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 PIK3AP1Q6ZUJ8 805 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 ACRBPQ8NEB7 543 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 FAM84BQ96KN1 310 aaPredicted RBP7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 CCDC88AQ3V6T2 1871 aa7.87□□□□□ -1.15
LINC-ROR-201ENST00000553704 GOLGA6L9A6NEM1 432 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 FGRP09769 529 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 CCDC175P0C221 793 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 XBP1P17861 261 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 MCM7P33993 719 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 ERVK-24P63145 666 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 MECOMQ03112 1051 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 KRT31Q15323 416 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 ANKRD18AQ8IVF6 992 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 NSUN4Q96CB9 384 aaKnown RBP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 CDC5LQ99459 802 aaKnown RBP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 RBM28Q9NW13 759 aaKnown RBP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 MINPP1Q9UNW1 487 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 TNRC6CQ9HCJ0 1690 aaKnown RBP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 DDAH1O94760 285 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 PRDX5P30044 214 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 RASGRP4Q8TDF6 673 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 ZBTB9Q96C00 473 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 CCDC34Q96HJ3 373 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 ARGLU1Q9NWB6 273 aaPredicted RBP7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 TAB2Q9NYJ8 693 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 TFCP2L1Q9NZI6 479 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 MAPK8IP1Q9UQF2 711 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 GDAQ9Y2T3 454 aa7.86□□□□□ -1.15
LINC-ROR-201ENST00000553704 KCNQ2O43526 872 aa7.85□□□□□ -1.15
LINC-ROR-201ENST00000553704 SCG2P13521 617 aa7.85□□□□□ -1.15
LINC-ROR-201ENST00000553704 DDB1Q16531 1140 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms