RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
CHD8-204ENST00000553622 ELP3Q9H9T3 547 aa11.41□□□□□ -0.58
CHD8-204ENST00000553622 NCOA5Q9HCD5 579 aaKnown RBP11.41□□□□□ -0.58
CHD8-204ENST00000553622 GBA2Q9HCG7 927 aaPredicted RBP11.41□□□□□ -0.58
CHD8-204ENST00000553622 CPLX1O14810 134 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 PFKFB2O60825 505 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 DTNBO60941 627 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 DDAH1O94760 285 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 CALM1P0DP23 149 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 CALM2P0DP24 149 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 CALM3P0DP25 149 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 ECE1P42892 770 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.4□□□□□ -0.58
CHD8-204ENST00000553622 ANKRD13AQ8IZ07 590 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.58
CHD8-204ENST00000553622 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 CTCFLQ8NI51 663 aaPredicted RBP11.4□□□□□ -0.58
CHD8-204ENST00000553622 ACER1Q8TDN7 264 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 IPO9Q96P70 1041 aaKnown RBP11.4□□□□□ -0.58
CHD8-204ENST00000553622 SH2D4AQ9H788 454 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 AS3MTQ9HBK9 375 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 GINM1Q9NU53 330 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
CHD8-204ENST00000553622 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
CHD8-204ENST00000553622 TRIM75PA6NK02 468 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 PPFIA3O75145 1194 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 ITGBL1O95965 494 aaPredicted RBP11.39□□□□□ -0.59
CHD8-204ENST00000553622 PARP1P09874 1014 aaKnown RBP11.39□□□□□ -0.59
CHD8-204ENST00000553622 PTPRAP18433 802 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 SCRN1Q12765 414 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 NOL9Q5SY16 702 aaKnown RBP11.39□□□□□ -0.59
CHD8-204ENST00000553622 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 RASGRP2Q7LDG7 609 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 FANCBQ8NB91 859 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 SNCAIPQ9Y6H5 919 aa11.39□□□□□ -0.59
CHD8-204ENST00000553622 PARP14Q460N5 1801 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 A0A1W2PRG0 241 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
CHD8-204ENST00000553622 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 KIF5BP33176 963 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 EVCP57679 992 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 SPP2Q13103 211 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 MTMR2Q13614 643 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 GRM4Q14833 912 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
CHD8-204ENST00000553622 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
CHD8-204ENST00000553622 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
CHD8-204ENST00000553622 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 CCDC196A0A1B0GTZ2 297 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 F5H6K3 240 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 TOMM70O94826 608 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 NDUFB10O96000 172 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 PDHBP11177 359 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 CDC27P30260 824 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 SLC1A4P43007 532 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 NOVP48745 357 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 FKBP1BP68106 108 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 KLRC3Q07444 240 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 ST3GAL1Q11201 340 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 TROAPQ12815 778 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 KCTD1Q719H9 257 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 PIBF1Q8WXW3 757 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 MKL1Q969V6 931 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 NUP88Q99567 741 aaPredicted RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 RBM28Q9NW13 759 aaKnown RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 SMC3Q9UQE7 1217 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 TMX2Q9Y320 296 aa11.37□□□□□ -0.59
CHD8-204ENST00000553622 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.37□□□□□ -0.59
CHD8-204ENST00000553622 LOC285556D6RIA3 1793 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 JAK2O60674 1132 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 CDKL5O76039 1030 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 PLEKHA8P1O95397 391 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 FOSBP53539 338 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 RCAN1P53805 252 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 HUNKP57058 714 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
CHD8-204ENST00000553622 CUL4AQ13619 759 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 ASPRV1Q53RT3 343 aa11.36□□□□□ -0.59
CHD8-204ENST00000553622 CST9Q5W186 159 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms