RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ECE1P42892 770 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 SNAPC2Q13487 334 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 COL9A3Q14050 684 aaPredicted RBP22.67■■□□□ 1.22
PSEN1-207ENST00000553599 USP17L2Q6R6M4 530 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 Q6ZUG5 572 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 CCDC84Q86UT8 332 aaPredicted RBP22.67■■□□□ 1.22
PSEN1-207ENST00000553599 GMCL1P1Q8NEA9 526 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 CNKSR2Q8WXI2 1034 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 LPAR1Q92633 364 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
PSEN1-207ENST00000553599 A0A0G2JLL6 359 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-207ENST00000553599 GJA5P36382 358 aa22.66■■□□□ 1.22
PSEN1-207ENST00000553599 MTMR2Q13614 643 aa22.66■■□□□ 1.22
PSEN1-207ENST00000553599 PRRT2Q7Z6L0 340 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-207ENST00000553599 PNMA1Q8ND90 353 aa22.66■■□□□ 1.22
PSEN1-207ENST00000553599 C12orf42Q96LP6 360 aa22.66■■□□□ 1.22
PSEN1-207ENST00000553599 VCPKMTQ9H867 229 aa22.66■■□□□ 1.22
PSEN1-207ENST00000553599 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-207ENST00000553599 CCDC69A6NI79 296 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 CETPP11597 493 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 NFXL1Q6ZNB6 911 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 FASTKD5Q7L8L6 764 aaKnown RBP22.65■■□□□ 1.22
PSEN1-207ENST00000553599 PROCA1Q8NCQ7 364 aaPredicted RBP22.65■■□□□ 1.22
PSEN1-207ENST00000553599 TCEANC2Q96MN5 208 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 LRRC2Q9BYS8 371 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 TMOD4Q9NZQ9 345 aa22.65■■□□□ 1.22
PSEN1-207ENST00000553599 FAM155AB1AL88 458 aaPredicted RBP22.64■■□□□ 1.21
PSEN1-207ENST00000553599 ST18O60284 1047 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 RCAN1P53805 252 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 EVCP57679 992 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 INHBEP58166 350 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 SYNE3Q6ZMZ3 975 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 CATIPQ7Z7H3 387 aa22.64■■□□□ 1.21
PSEN1-207ENST00000553599 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-207ENST00000553599 F5H6K3 240 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 DDAH1O94760 285 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 CALM1P0DP23 149 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 CALM2P0DP24 149 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 CALM3P0DP25 149 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 KLRC3Q07444 240 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 NOGQ13253 232 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 REM2Q8IYK8 340 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-207ENST00000553599 LRRC47Q8N1G4 583 aaKnown RBP22.63■■□□□ 1.21
PSEN1-207ENST00000553599 BRF1Q92994 677 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 MAP3K14Q99558 947 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 SLC12A7Q9Y666 1083 aa22.63■■□□□ 1.21
PSEN1-207ENST00000553599 HMGCS2P54868 508 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 TOB2Q14106 344 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-207ENST00000553599 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 PAXIP1Q6ZW49 1069 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-207ENST00000553599 ZNF654Q8IZM8 581 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 DCAF4Q8WV16 495 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 MS4A4AQ96JQ5 239 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-207ENST00000553599 EMILIN3Q9NT22 766 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 PTPRFP10586 1907 aa22.62■■□□□ 1.21
PSEN1-207ENST00000553599 TESPA1A2RU30 521 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-207ENST00000553599 WDR46O15213 610 aaKnown RBP22.61■■□□□ 1.21
PSEN1-207ENST00000553599 NDUFB10O96000 172 aa22.61■■□□□ 1.21
PSEN1-207ENST00000553599 SNHG28P0DPA3 235 aa22.61■■□□□ 1.21
PSEN1-207ENST00000553599 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
PSEN1-207ENST00000553599 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
PSEN1-207ENST00000553599 MCM2P49736 904 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 AK2P54819 239 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 SREBF2Q12772 1141 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 TROAPQ12815 778 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 PABPC4Q13310 644 aaKnown RBP eCLIP22.6■■□□□ 1.21
PSEN1-207ENST00000553599 PPP2R5BQ15173 497 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 ZYXQ15942 572 aaKnown RBP22.6■■□□□ 1.21
PSEN1-207ENST00000553599 CYP4F22Q6NT55 531 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 APOA5Q6Q788 366 aa22.6■■□□□ 1.21
PSEN1-207ENST00000553599 ZNF274Q96GC6 653 aaPredicted RBP22.6■■□□□ 1.21
PSEN1-207ENST00000553599 CCL15-CCL14A0A0B4J2E2 113 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 KLF18A0A0U1RQI7 1052 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 PDHBP11177 359 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 SLC1A4P43007 532 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 CCL15Q16663 113 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 GPATCH4Q5T3I0 446 aaKnown RBP22.59■■□□□ 1.21
PSEN1-207ENST00000553599 ZCCHC17Q9NP64 241 aaKnown RBP22.59■■□□□ 1.21
PSEN1-207ENST00000553599 SLC45A1Q9Y2W3 748 aa22.59■■□□□ 1.21
PSEN1-207ENST00000553599 ZBTB43O43298 467 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 RAD21O60216 631 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 BMP3P12645 472 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 VCAM1P19320 739 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 MAP2K2P36507 400 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 APOBRQ0VD83 1088 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 MKRN3Q13064 507 aaKnown RBP22.58■■□□□ 1.21
PSEN1-207ENST00000553599 MOGSQ13724 837 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 ASPRV1Q53RT3 343 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 GADL1Q6ZQY3 521 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 BRPF3Q9ULD4 1205 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 AGTPBP1Q9UPW5 1226 aa22.58■■□□□ 1.21
PSEN1-207ENST00000553599 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
PSEN1-207ENST00000553599 PLA2G6O60733 806 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 PARP1P09874 1014 aaKnown RBP22.57■■□□□ 1.2
PSEN1-207ENST00000553599 HOXA7P31268 230 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-207ENST00000553599 KIF5BP33176 963 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms