RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 WDHD1O75717 1129 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ALDH1L1O75891 902 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 BCRP11274 1271 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 CCL5P13501 91 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 EXOSC9Q06265 439 aaKnown RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 RABL6Q3YEC7 729 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-219ENST00000553488 DCAF15Q66K64 600 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 PNMA1Q8ND90 353 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 MRIQ9BWK5 157 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 ZNF112Q9UJU3 913 aa9.18□□□□□ -0.94
ATXN3-219ENST00000553488 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
ATXN3-219ENST00000553488 RFX7Q2KHR2 1363 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 MAST3O60307 1309 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 KIF16BQ96L93 1317 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 SOX1O00570 391 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-219ENST00000553488 NBPF7P0C2Y1 421 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-219ENST00000553488 PRKCZQ05513 592 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 NOL9Q5SY16 702 aaKnown RBP9.17□□□□□ -0.94
ATXN3-219ENST00000553488 HHIPL2Q6UWX4 724 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 ANKRD44Q8N8A2 993 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 RAET1EQ8TD07 263 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 DPF3Q92784 378 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 HOOK2Q96ED9 719 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 HTATIP2Q9BUP3 242 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 TMOD2Q9NZR1 351 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 SUGT1Q9Y2Z0 365 aa9.17□□□□□ -0.94
ATXN3-219ENST00000553488 CDH23Q9H251 3354 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 A0A1W2PPC1 479 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 FARP2O94887 1054 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 FGFR2P21802 821 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 GPAT2Q6NUI2 795 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 ZBTB33Q86T24 672 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 U2AF1L4Q8WU68 220 aaKnown RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 PARK7Q99497 189 aaKnown RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 C9orf78Q9NZ63 289 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
ATXN3-219ENST00000553488 GABRQQ9UN88 632 aa9.16□□□□□ -0.94
ATXN3-219ENST00000553488 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 PDE8BO95263 885 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 CYP2C8P10632 490 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 FSHRP23945 695 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 HOXD10P28358 340 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
ATXN3-219ENST00000553488 NFIAQ12857 509 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 METTL24Q5JXM2 366 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 VPS37DQ86XT2 251 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 FAM151AQ8WW52 585 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 DAGLAQ9Y4D2 1042 aa9.15□□□□□ -0.94
ATXN3-219ENST00000553488 A0A0G2JLL6 359 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-219ENST00000553488 DLL1O00548 723 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 SGPL1O95470 568 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 FCGRTP55899 365 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 UBXN2AP68543 259 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 CAVIN4Q5BKX8 364 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 CDC42EP5Q6NZY7 148 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 PRRT2Q7Z6L0 340 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-219ENST00000553488 WDR63Q8IWG1 891 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 PAK6Q9NQU5 681 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-219ENST00000553488 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 SIPA1L1O43166 1804 aa9.14□□□□□ -0.95
ATXN3-219ENST00000553488 MUC3AQ02505 3323 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 CDK5RAP2Q96SN8 1893 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 PHF20L1A8MW92 1017 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 CXCL11O14625 94 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 FRAT2O75474 233 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-219ENST00000553488 INHAP05111 366 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 ELNP15502 786 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 PRDX5P30044 214 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 TCP10Q12799 353 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 IRF5Q13568 498 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 PUM3Q15397 648 aaKnown RBP9.13□□□□□ -0.95
ATXN3-219ENST00000553488 SLC4A10Q6U841 1118 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 SLC17A8Q8NDX2 589 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-219ENST00000553488 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
ATXN3-219ENST00000553488 MAST2Q6P0Q8 1798 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 ESPNB1AK53 854 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 ADCY3O60266 1144 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 ZIC2O95409 532 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-219ENST00000553488 BMP1P13497 986 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 RFX5P48382 616 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-219ENST00000553488 FLT3LGP49771 235 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 ZFPM1Q8IX07 1006 aa9.12□□□□□ -0.95
ATXN3-219ENST00000553488 CCDC116Q8IYX3 515 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms