RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 FAM110CQ1W6H9 321 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 NCOA7Q8NI08 942 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 CTDP1Q9Y5B0 961 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 SIPA1L1O43166 1804 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 PRDM1O75626 825 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 VCAM1P19320 739 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 TRAF1Q13077 416 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 RRP12Q5JTH9 1297 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 GPAT2Q6NUI2 795 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 CATSPERGQ6ZRH7 1159 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 RABGAP1Q9Y3P9 1069 aa12.08□□□□□ -0.48
TRAFD1-208ENST00000552890 F5H6K3 240 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 FOXP2O15409 715 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 PLA2G6O60733 806 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 CAPN2P17655 700 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 PSMA5P28066 241 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 MAPK4P31152 587 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 FCGRTP55899 365 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 HAND2P61296 217 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 KLRC3Q07444 240 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 MOGSQ13724 837 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 C17orf99Q6UX52 265 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 PRPF38AQ8NAV1 312 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 COA7Q96BR5 231 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 TANGO6Q9C0B7 1094 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-208ENST00000552890 PCNTO95613 3336 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 FLOT1O75955 427 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 MCM5P33992 734 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 SLC1A4P43007 532 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 NOVP48745 357 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 HERVK_113P62684 666 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 TSGA10IPQ3SY00 556 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 ZNF296Q8WUU4 475 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 ZSCAN10Q96SZ4 725 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 RPAP3Q9H6T3 665 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 KAT14Q9H8E8 782 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 SLC5A4Q9NY91 659 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 MORF4L1Q9UBU8 362 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 PHIPQ8WWQ0 1821 aa12.06□□□□□ -0.48
TRAFD1-208ENST00000552890 RAD21O60216 631 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 ZBED4O75132 1171 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 KDM4AO75164 1064 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 SLC25A27O95847 323 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 BMP3P12645 472 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 JAG1P78504 1218 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 LACTBP83111 547 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 TMEM87BQ96K49 555 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 MAF1Q9H063 256 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 PTPRFP10586 1907 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
TRAFD1-208ENST00000552890 A0A1W2PRG0 241 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 STRNO43815 780 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 CYP21A2P08686 494 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 BCRP11274 1271 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 STAT2P52630 851 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 OAZ1P54368 228 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 PTH1RQ03431 593 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 IFIT1BQ5T764 474 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAFD1-208ENST00000552890 MROH8Q9H579 483 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms