RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ZBED3Q96IU2 234 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 LZTS2Q9BRK4 669 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 OSBPL5Q9H0X9 879 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.41□□□□□ -0.58
TMEM116-216ENST00000552800 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 SYNPO2Q9UMS6 1093 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
TMEM116-216ENST00000552800 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 C21orf2O43822 256 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 NASPP49321 788 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 KIF23Q02241 960 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 MAP3K10Q02779 954 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 PKN1Q16512 942 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 TATDN1Q6P1N9 297 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 NFXL1Q6ZNB6 911 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 TMTC3Q6ZXV5 915 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 MKL1Q969V6 931 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 DDX11Q96FC9 970 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 ZNF396Q96N95 335 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 FOXP1Q9H334 677 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-216ENST00000552800 SH3GLB2Q9NR46 395 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 KCNQ5Q9NR82 932 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 CNPY2Q9Y2B0 182 aa11.4□□□□□ -0.58
TMEM116-216ENST00000552800 TSPY2A6NKD2 308 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 YEATS4O95619 227 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 SNHG28P0DPA3 235 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 NCLP19338 710 aaKnown RBP11.39□□□□□ -0.59
TMEM116-216ENST00000552800 KIF5BP33176 963 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 AOC3Q16853 763 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 RRP12Q5JTH9 1297 aaKnown RBP11.39□□□□□ -0.59
TMEM116-216ENST00000552800 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 DBNDD1Q9H9R9 158 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
TMEM116-216ENST00000552800 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 PI4KBQ9UBF8 816 aa11.39□□□□□ -0.59
TMEM116-216ENST00000552800 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 FAM237AA0A1B0GTK4 181 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 A0A1W2PQ27 194 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 A0A1W2PQ64 194 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 A0A1W2PQD8 194 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 GRM4Q14833 912 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 DALRD3Q5D0E6 543 aaKnown RBP11.38□□□□□ -0.59
TMEM116-216ENST00000552800 MYSM1Q5VVJ2 828 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 KRT40Q6A162 431 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
TMEM116-216ENST00000552800 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
TMEM116-216ENST00000552800 DYNLL2Q96FJ2 89 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 ZKSCAN3Q9BRR0 538 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 SERPINB13Q9UIV8 391 aa11.38□□□□□ -0.59
TMEM116-216ENST00000552800 MYH6P13533 1939 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 PPP6R2O75170 966 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 GADD45BO75293 160 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-216ENST00000552800 PRDM1O75626 825 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 MMP1P03956 469 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
TMEM116-216ENST00000552800 ADALQ6DHV7 355 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 FAM83AQ86UY5 434 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-216ENST00000552800 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
TMEM116-216ENST00000552800 LINC00301Q8NCQ3 95 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 CHAMP1Q96JM3 812 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TMEM47Q9BQJ4 181 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 PHF20Q9BVI0 1012 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 SPZ1Q9BXG8 430 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 MTMR4Q9NYA4 1195 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 TMEM63CQ9P1W3 806 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 MAD2L2Q9UI95 211 aa11.37□□□□□ -0.59
TMEM116-216ENST00000552800 RPS12P25398 132 aaKnown RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 SHMT1P34896 483 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 ZNF280AP59817 542 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 SLC39A14Q15043 492 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 FAM47AQ5JRC9 791 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 L1TD1Q5T7N2 865 aaKnown RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 FOXD4L5Q5VV16 416 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 PNMA1Q8ND90 353 aa11.36□□□□□ -0.59
TMEM116-216ENST00000552800 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-216ENST00000552800 FOXD4L4Q8WXT5 416 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms