RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
LETMD1-233ENST00000552433 FAM53CQ9NYF3 392 aa8.7□□□□□ -1.02
LETMD1-233ENST00000552433 KRTAP4-8A0A0G2JLE6 195 aa8.69□□□□□ -1.02
LETMD1-233ENST00000552433 TLR3O15455 904 aaKnown RBP8.69□□□□□ -1.02
LETMD1-233ENST00000552433 TNNI2P48788 182 aa8.69□□□□□ -1.02
LETMD1-233ENST00000552433 PKN1Q16512 942 aa8.69□□□□□ -1.02
LETMD1-233ENST00000552433 FAM84AQ96KN4 292 aa8.69□□□□□ -1.02
LETMD1-233ENST00000552433 KCNK12Q9HB15 430 aa8.69□□□□□ -1.02
LETMD1-233ENST00000552433 DNAJA2O60884 412 aa8.68□□□□□ -1.02
LETMD1-233ENST00000552433 TMPRSS7Q7RTY8 843 aa8.68□□□□□ -1.02
LETMD1-233ENST00000552433 DTWD2Q8NBA8 298 aa8.68□□□□□ -1.02
LETMD1-233ENST00000552433 KBTBD4Q9NVX7 518 aa8.68□□□□□ -1.02
LETMD1-233ENST00000552433 HTR3BO95264 441 aa8.67□□□□□ -1.02
LETMD1-233ENST00000552433 NCLP19338 710 aaKnown RBP8.67□□□□□ -1.02
LETMD1-233ENST00000552433 GARTP22102 1010 aa8.67□□□□□ -1.02
LETMD1-233ENST00000552433 DIRC2Q96SL1 478 aa8.67□□□□□ -1.02
LETMD1-233ENST00000552433 TRIT1Q9H3H1 467 aaKnown RBP8.67□□□□□ -1.02
LETMD1-233ENST00000552433 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
LETMD1-233ENST00000552433 RB1CC1Q8TDY2 1594 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 PWP1Q13610 501 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 GAB4Q2WGN9 574 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 PHACTR4Q8IZ21 702 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 ABHD4Q8TB40 342 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 KIF2CQ99661 725 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 DUSP13Q9UII6 198 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 TMEM59LQ9UK28 342 aa8.66□□□□□ -1.02
LETMD1-233ENST00000552433 SRFP11831 508 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 ERCC3P19447 782 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 PTMSP20962 102 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 TRHRP34981 398 aaPredicted RBP8.65□□□□□ -1.02
LETMD1-233ENST00000552433 EGR3Q06889 387 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 MPP2Q14168 576 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 FBXL19Q6PCT2 694 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 REC114Q7Z4M0 266 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 CCDC120Q96HB5 630 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 CCDC74BQ96LY2 380 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 GPR62Q9BZJ7 368 aa8.65□□□□□ -1.02
LETMD1-233ENST00000552433 FAM196AQ6ZSG2 479 aa8.64□□□□□ -1.03
LETMD1-233ENST00000552433 SYDE1Q6ZW31 735 aaPredicted RBP8.64□□□□□ -1.03
LETMD1-233ENST00000552433 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
LETMD1-233ENST00000552433 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
LETMD1-233ENST00000552433 MYLIPQ8WY64 445 aa8.64□□□□□ -1.03
LETMD1-233ENST00000552433 BCL2L13Q9BXK5 485 aa8.64□□□□□ -1.03
LETMD1-233ENST00000552433 ARID1BQ8NFD5 2236 aaPredicted RBP8.64□□□□□ -1.03
LETMD1-233ENST00000552433 RAC2P15153 192 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 GBP1P32455 592 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 ERMP1Q7Z2K6 904 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 TEX2Q8IWB9 1127 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 NSUN3Q9H649 340 aaKnown RBP8.63□□□□□ -1.03
LETMD1-233ENST00000552433 C19orf44Q9H6X5 657 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 PCDHA11Q9Y5I1 949 aa8.63□□□□□ -1.03
LETMD1-233ENST00000552433 SHISA3A0PJX4 238 aa8.62□□□□□ -1.03
LETMD1-233ENST00000552433 LTKP29376 864 aa8.62□□□□□ -1.03
LETMD1-233ENST00000552433 EIF4A3P38919 411 aaKnown RBP8.62□□□□□ -1.03
LETMD1-233ENST00000552433 GIPC2Q8TF65 315 aa8.62□□□□□ -1.03
LETMD1-233ENST00000552433 SLC22A31A6NKX4 558 aa8.61□□□□□ -1.03
LETMD1-233ENST00000552433 ARSHQ5FYA8 562 aa8.61□□□□□ -1.03
LETMD1-233ENST00000552433 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
LETMD1-233ENST00000552433 PLCD4Q9BRC7 762 aa8.61□□□□□ -1.03
LETMD1-233ENST00000552433 PCDHB14Q9Y5E9 798 aa8.61□□□□□ -1.03
LETMD1-233ENST00000552433 HPXP02790 462 aa8.6□□□□□ -1.03
LETMD1-233ENST00000552433 RAP1GAPP47736 663 aa8.6□□□□□ -1.03
LETMD1-233ENST00000552433 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
LETMD1-233ENST00000552433 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
LETMD1-233ENST00000552433 GGT7Q9UJ14 662 aa8.6□□□□□ -1.03
LETMD1-233ENST00000552433 GREM1O60565 184 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 ZGLP1P0C6A0 271 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 CRKP46108 304 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 CHMP4BP1P59074 171 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 VWCEQ96DN2 955 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 SP110Q9HB58 689 aa8.59□□□□□ -1.03
LETMD1-233ENST00000552433 SUPT16HQ9Y5B9 1047 aaKnown RBP8.59□□□□□ -1.03
LETMD1-233ENST00000552433 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 C1QTNF9P0C862 333 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 ITGAEP38570 1179 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 CLEC16AQ2KHT3 1053 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 TMED8Q6PL24 325 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-233ENST00000552433 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 RNF32Q9H0A6 362 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 PRDM16Q9HAZ2 1276 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 DCP1AQ9NPI6 582 aaPredicted RBP8.58□□□□□ -1.04
LETMD1-233ENST00000552433 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 ADAMTS1Q9UHI8 967 aa8.58□□□□□ -1.04
LETMD1-233ENST00000552433 UNC13AQ9UPW8 1703 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 A0A0U1RQG5 324 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-233ENST00000552433 RGS13O14921 159 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 MAFGO15525 162 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 UBOX5O94941 541 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 RAG1P15918 1043 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 POLR2BP30876 1174 aaKnown RBP8.57□□□□□ -1.04
LETMD1-233ENST00000552433 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-233ENST00000552433 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
LETMD1-233ENST00000552433 FBXO15Q8NCQ5 510 aaPredicted RBP8.57□□□□□ -1.04
LETMD1-233ENST00000552433 EBF1Q9UH73 591 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms