RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 GSTM4Q03013 218 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 PCGF6Q9BYE7 350 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 LATS2Q9NRM7 1088 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 PNPLA7Q6ZV29 1317 aa9.55□□□□□ -0.88
GNPTAB-209ENST00000552009 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 TGFB1P01137 390 aa9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 POLR3DP05423 398 aaPredicted RBP9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 ESRRAP11474 423 aaPredicted RBP9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 PEAR1Q5VY43 1037 aaPredicted RBP9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 SMIM5Q71RC9 77 aa9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 UTRNP46939 3433 aa9.54□□□□□ -0.88
GNPTAB-209ENST00000552009 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 LOC100289279A0A1B0GTE1 492 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 EXOSC6Q5RKV6 272 aaKnown RBP9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 HP1BP3Q5SSJ5 553 aaPredicted RBP9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 HGSNATQ68CP4 663 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 SMG8Q8ND04 991 aaKnown RBP9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 TFCP2L1Q9NZI6 479 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 KIF20BQ96Q89 1820 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 TUBGCP6Q96RT7 1819 aa9.53□□□□□ -0.88
GNPTAB-209ENST00000552009 MAP4P27816 1152 aaKnown RBP9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 USP11P51784 963 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 GALNT12Q8IXK2 581 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 NLGN2Q8NFZ4 835 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 KRTAP4-8Q9BYQ9 185 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 SUGCTQ9HAC7 445 aa9.52□□□□□ -0.89
GNPTAB-209ENST00000552009 SMG6Q86US8 1419 aaKnown RBP9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 A0A096LPE4 126 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 PCDH1Q08174 1060 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 MPRIPQ6WCQ1 1025 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 AMIGO3Q86WK7 504 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 YIPF2Q9BWQ6 316 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 CLEC4MQ9H2X3 399 aaPredicted RBP9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
GNPTAB-209ENST00000552009 INSRP06213 1382 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 FLT4P35916 1363 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 A0A1W2PP55 124 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 METTL12A8MUP2 240 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 KIAA1324LA8MWY0 1029 aaPredicted RBP9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 CYP27B1O15528 508 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 CYP11A1P05108 521 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 SERPINB4P48594 390 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 COL23A1Q86Y22 540 aaPredicted RBP9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 CCNJLQ8IV13 435 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 SHKBP1Q8TBC3 707 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 ATG3Q9NT62 314 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 KAT6BQ8WYB5 2073 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 LY75O60449 1722 aa9.5□□□□□ -0.89
GNPTAB-209ENST00000552009 WDR64B1ANS9 1081 aa9.49□□□□□ -0.89
GNPTAB-209ENST00000552009 GPR162Q16538 588 aa9.49□□□□□ -0.89
GNPTAB-209ENST00000552009 PAOXQ6QHF9 649 aa9.49□□□□□ -0.89
GNPTAB-209ENST00000552009 ARID3AQ99856 593 aa9.49□□□□□ -0.89
GNPTAB-209ENST00000552009 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
GNPTAB-209ENST00000552009 CPNE3O75131 537 aaKnown RBP9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 TIAF1O95411 115 aa9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 POLD1P28340 1107 aa9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 SGO2Q562F6 1265 aa9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 PCDH11XQ9BZA7 1347 aa9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 PCDH11YQ9BZA8 1340 aa9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
GNPTAB-209ENST00000552009 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
GNPTAB-209ENST00000552009 EHD4Q9H223 541 aa9.47□□□□□ -0.89
GNPTAB-209ENST00000552009 C5P01031 1676 aa9.47□□□□□ -0.89
GNPTAB-209ENST00000552009 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.89
GNPTAB-209ENST00000552009 FAM95CA0A1B0GW59 222 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 MED26O95402 600 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 YBX3P16989 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 NFKBIBQ15653 356 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 CCER1Q8TC90 406 aaPredicted RBP9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 PIGBQ92521 554 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 TCF12Q99081 682 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 RAD18Q9NS91 495 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
GNPTAB-209ENST00000552009 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 GRIA4P48058 902 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 IRAK1P51617 712 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 ARHGAP4P98171 946 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 POU4F3Q15319 338 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 SPRED3Q2MJR0 410 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 FBXL6Q8N531 539 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 CORO1BQ9BR76 489 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 OSBPL1AQ9BXW6 950 aa9.45□□□□□ -0.9
GNPTAB-209ENST00000552009 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms