RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 EYA2O00167 538 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 ADAMTS4O75173 837 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 CCNA1P78396 465 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 LBX2Q6XYB7 198 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 DZIP1Q86YF9 867 aaKnown RBP12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 C12orf42Q96LP6 360 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 CDK5RAP2Q96SN8 1893 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 MOV10L1Q9BXT6 1211 aaKnown RBP12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 ZFHX2Q9C0A1 2572 aaPredicted RBP12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 HERC5Q9UII4 1024 aaKnown RBP12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 MYO15AQ9UKN7 3530 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 IVNS1ABPQ9Y6Y0 642 aa12.75□□□□□ -0.37
SLC48A1-209ENST00000552003 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L15C9J2P7 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L13C9JLJ4 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L11C9JVI0 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L18D6R9N7 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L22D6RA61 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L17D6RBQ6 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L19D6RCP7 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L20D6RJB6 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 ARHGEF15O94989 841 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 CDK7P50613 346 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L24Q0WX57 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 UIMC1Q96RL1 719 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 COG5Q9UP83 839 aa12.74□□□□□ -0.37
SLC48A1-209ENST00000552003 UMODL1Q5DID0 1318 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 ZNF521Q96K83 1311 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 MYADML2A6NDP7 307 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 SEMA3EO15041 775 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 ACLYP53396 1101 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 ATP2B3Q16720 1220 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 PSRC1Q6PGN9 363 aaPredicted RBP12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 MAML3Q96JK9 1138 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
SLC48A1-209ENST00000552003 FANCIQ9NVI1 1328 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 VCAM1P19320 739 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 CYP2C18P33260 490 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 RNF180Q86T96 592 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 KLHDC9Q8NEP7 349 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 ACER1Q8TDN7 264 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 HLA-CQ95604 372 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 DMDP11532 3685 aa12.72□□□□□ -0.37
SLC48A1-209ENST00000552003 ZNF865P0CJ78 1059 aaPredicted RBP12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 RARBP10826 455 aa12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 ERCC3P19447 782 aa12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.37
SLC48A1-209ENST00000552003 LPXNO60711 386 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 GH2P01242 217 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 FGBP02675 491 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 KCNA10Q16322 511 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 TEX11Q8IYF3 940 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 GJD3Q8N144 294 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
SLC48A1-209ENST00000552003 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 FOCADQ5VW36 1801 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 STRNO43815 780 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 ZGPATQ8N5A5 531 aaKnown RBP12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 TSEN34Q9BSV6 310 aaKnown RBP12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 SPATC1LQ9H0A9 340 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 SIL1Q9H173 461 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 RPAP3Q9H6T3 665 aaPredicted RBP12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 PALD1Q9ULE6 856 aa12.69□□□□□ -0.38
SLC48A1-209ENST00000552003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms