RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 KIF5BP33176 963 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 PPATQ06203 517 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 KLRC3Q07444 240 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 FSTL1Q12841 308 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 NTRK3Q16288 839 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 SH3D19Q5HYK7 790 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 MAP1SQ66K74 1059 aaPredicted RBP8.89□□□□□ -0.99
USP44-206ENST00000551837 CPLX2Q6PUV4 134 aaKnown RBP8.89□□□□□ -0.99
USP44-206ENST00000551837 NFXL1Q6ZNB6 911 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 ZNF654Q8IZM8 581 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 C2orf69Q8N8R5 385 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 PNMA1Q8ND90 353 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 WRNIP1Q96S55 665 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 LRRC2Q9BYS8 371 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 STX8Q9UNK0 236 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 ECM29Q5VYK3 1845 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 ADAMTSL1Q8N6G6 1762 aa8.89□□□□□ -0.99
USP44-206ENST00000551837 PASKQ96RG2 1323 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 A0A1W2PRG0 241 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 IFNAR1P17181 557 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 INPP5BP32019 993 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 USP14P54578 494 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 BACE1P56817 501 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 ICA1Q05084 483 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 SCRN1Q12765 414 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 GPATCH4Q5T3I0 446 aaKnown RBP8.88□□□□□ -0.99
USP44-206ENST00000551837 CST9Q5W186 159 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 BTNL9Q6UXG8 535 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 ERO1BQ86YB8 467 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 FAM177A1Q8N128 213 aaPredicted RBP8.88□□□□□ -0.99
USP44-206ENST00000551837 ZNF280CQ8ND82 737 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 SMC1BQ8NDV3 1235 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 CTCFLQ8NI51 663 aaPredicted RBP8.88□□□□□ -0.99
USP44-206ENST00000551837 SMARCC2Q8TAQ2 1214 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 LPAR1Q92633 364 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 GTF3C6Q969F1 213 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 ZKSCAN4Q969J2 545 aaPredicted RBP8.88□□□□□ -0.99
USP44-206ENST00000551837 HHIPL1Q96JK4 782 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 C12orf42Q96LP6 360 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 PICK1Q9NRD5 415 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 CSADQ9Y600 493 aa8.88□□□□□ -0.99
USP44-206ENST00000551837 SPDYE5A6NIY4 337 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 CDKL5O76039 1030 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 GDF11O95390 407 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 FDX1P10109 184 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 PDHBP11177 359 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 CDC27P30260 824 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 ADD1P35611 737 aaKnown RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 METAP2P50579 478 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP44-206ENST00000551837 HMGN5P82970 282 aaKnown RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 GRM4Q14833 912 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 RAB3GAP1Q15042 981 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 ASPRV1Q53RT3 343 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 DCAF4Q8WV16 495 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 LARP6Q9BRS8 491 aaKnown RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 RIOX1Q9H6W3 641 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 DAXXQ9UER7 740 aaPredicted RBP8.87□□□□□ -0.99
USP44-206ENST00000551837 MAD2L2Q9UI95 211 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 MYH1P12882 1939 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 CDK5RAP2Q96SN8 1893 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 LAMA4Q16363 1823 aa8.87□□□□□ -0.99
USP44-206ENST00000551837 KLRF2D3W0D1 207 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 PRPF3O43395 683 aaKnown RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 LARGE1O95461 756 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 CTDNEP1O95476 244 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 PARP1P09874 1014 aaKnown RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 YY1P25490 414 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 ZNF543Q08ER8 600 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 FUT2Q10981 343 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 ST3GAL1Q11201 340 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 SPP2Q13103 211 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 VGLL4Q14135 290 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 RTN1Q16799 776 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 SLFN13Q68D06 897 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 DLK2Q6UY11 383 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 TEX2Q8IWB9 1127 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 ACER1Q8TDN7 264 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 CHURC1Q8WUH1 139 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 SLC10A4Q96EP9 437 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 GBA2Q9HCG7 927 aaPredicted RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 SNCAIPQ9Y6H5 919 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 ZHX2Q9Y6X8 837 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
USP44-206ENST00000551837 BAZ2AQ9UIF9 1905 aaKnown RBP8.86□□□□□ -0.99
USP44-206ENST00000551837 NAV1Q8NEY1 1877 aa8.85□□□□□ -0.99
USP44-206ENST00000551837 GOLGA8AA7E2F4 631 aa8.85□□□□□ -0.99
USP44-206ENST00000551837 GOLGA8BA8MQT2 603 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms