RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.08■■□□□ 1.45
PRDM4-205ENST00000550376 SNED1Q8TER0 1413 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 NAV1Q8NEY1 1877 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 CDK5RAP2Q96SN8 1893 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 FAM196BA6NMK8 535 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 LONRF3Q496Y0 759 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 ZSCAN30Q86W11 494 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 KRI1Q8N9T8 703 aaKnown RBP24.08■■□□□ 1.45
PRDM4-205ENST00000550376 VAT1LQ9HCJ6 419 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 PFKFB3Q16875 520 aaPredicted RBP24.07■■□□□ 1.44
PRDM4-205ENST00000550376 FOXN1O15353 648 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 CRKP46108 304 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 RESP18Q5W5W9 173 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 STYK1Q6J9G0 422 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 PIK3AP1Q6ZUJ8 805 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 PDILTQ8N807 584 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 TEKT1Q969V4 418 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 KIAA1468Q9P260 1216 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 FBXO2Q9UK22 296 aaPredicted RBP24.07■■□□□ 1.44
PRDM4-205ENST00000550376 ADAMTSL1Q8N6G6 1762 aa24.07■■□□□ 1.44
PRDM4-205ENST00000550376 IGSF3O75054 1194 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 AKR1B1P15121 316 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 GRM4Q14833 912 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 PODNQ7Z5L7 613 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 NEDD1Q8NHV4 660 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 ANKS1AQ92625 1134 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 HPSEQ9Y251 543 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 STX1AQ16623 288 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 DPCR1Q3MIW9 517 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 TCP11L1Q9NUJ3 509 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 KCNH3Q9ULD8 1083 aa24.06■■□□□ 1.44
PRDM4-205ENST00000550376 PNOCQ13519 176 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 SHROOM1Q2M3G4 852 aaPredicted RBP24.05■■□□□ 1.44
PRDM4-205ENST00000550376 CERS3Q8IU89 383 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 ZNF287Q9HBT7 754 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 DLEC1Q9Y238 1755 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 DDX60LQ5H9U9 1706 aaKnown RBP24.05■■□□□ 1.44
PRDM4-205ENST00000550376 CUTAO60888 179 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 HOMER1Q86YM7 354 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 LRRC47Q8N1G4 583 aaKnown RBP24.05■■□□□ 1.44
PRDM4-205ENST00000550376 UBA5Q9GZZ9 404 aa24.05■■□□□ 1.44
PRDM4-205ENST00000550376 KLRF2D3W0D1 207 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 IQCB1Q15051 598 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 TNFRSF25Q93038 417 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 TTC12Q9H892 705 aaPredicted RBP24.04■■□□□ 1.44
PRDM4-205ENST00000550376 USP17L5A8MUK1 530 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 DACT2Q5SW24 774 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 HEATR3Q7Z4Q2 680 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 CSRNP2Q9H175 543 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 CCDC39Q9UFE4 941 aa24.04■■□□□ 1.44
PRDM4-205ENST00000550376 FRMPD2Q68DX3 1309 aaPredicted RBP24.04■■□□□ 1.44
PRDM4-205ENST00000550376 TRIM75PA6NK02 468 aa24.03■■□□□ 1.44
PRDM4-205ENST00000550376 PTPREP23469 700 aa24.03■■□□□ 1.44
PRDM4-205ENST00000550376 CNKSR1Q969H4 720 aa24.03■■□□□ 1.44
PRDM4-205ENST00000550376 NOL7Q9UMY1 257 aaKnown RBP24.03■■□□□ 1.44
PRDM4-205ENST00000550376 SUGT1Q9Y2Z0 365 aa24.03■■□□□ 1.44
PRDM4-205ENST00000550376 MYH1P12882 1939 aa24.03■■□□□ 1.44
PRDM4-205ENST00000550376 MSNP26038 577 aaKnown RBP24.03■■□□□ 1.44
PRDM4-205ENST00000550376 PALM3A6NDB9 673 aaPredicted RBP24.02■■□□□ 1.44
PRDM4-205ENST00000550376 GABPAQ06546 454 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 WWC2Q6AWC2 1192 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 GRAMD1CQ8IYS0 662 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 OSBPL5Q9H0X9 879 aaPredicted RBP24.02■■□□□ 1.44
PRDM4-205ENST00000550376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.02■■□□□ 1.44
PRDM4-205ENST00000550376 POLR2DO15514 142 aaKnown RBP24.02■■□□□ 1.44
PRDM4-205ENST00000550376 ATP2B2Q01814 1243 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 FOXP4Q8IVH2 680 aaPredicted RBP24.02■■□□□ 1.44
PRDM4-205ENST00000550376 EPSTI1Q96J88 318 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 BRMS1Q9HCU9 246 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 ANO10Q9NW15 660 aa24.02■■□□□ 1.44
PRDM4-205ENST00000550376 MPHOSPH10O00566 681 aaKnown RBP24.01■■□□□ 1.43
PRDM4-205ENST00000550376 CLCN1P35523 988 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 HHIPL2Q6UWX4 724 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 DHX40Q8IX18 779 aaKnown RBP24.01■■□□□ 1.43
PRDM4-205ENST00000550376 TRIM5Q9C035 493 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 SERPINB13Q9UIV8 391 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 SCN9AQ15858 1988 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 AOPEPQ8N6M6 819 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 CLIP2Q9UDT6 1046 aa24.01■■□□□ 1.43
PRDM4-205ENST00000550376 YDJCA8MPS7 323 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 MCM7P33993 719 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 STRIP1Q5VSL9 837 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 METTL16Q86W50 562 aaKnown RBP24■■□□□ 1.43
PRDM4-205ENST00000550376 KLHL34Q8N239 644 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 CNNM3Q8NE01 707 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 PPIP5K2O43314 1243 aa24■■□□□ 1.43
PRDM4-205ENST00000550376 SRPRBQ9Y5M8 271 aaKnown RBP24■■□□□ 1.43
PRDM4-205ENST00000550376 DDTLA6NHG4 134 aaPredicted RBP23.99■■□□□ 1.43
PRDM4-205ENST00000550376 BECN2A8MW95 431 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 PARP1P09874 1014 aaKnown RBP23.99■■□□□ 1.43
PRDM4-205ENST00000550376 SHMT1P34896 483 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 ZRSR1Q15695 479 aaKnown RBP23.99■■□□□ 1.43
PRDM4-205ENST00000550376 HS1BP3Q53T59 392 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 TTC38Q5R3I4 469 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 ZSCAN29Q8IWY8 852 aaPredicted RBP23.99■■□□□ 1.43
PRDM4-205ENST00000550376 MTMR4Q9NYA4 1195 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 ZKSCAN5Q9Y2L8 839 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 GOLGA6L19H0YKK7 550 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 PTGDRQ13258 359 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms