RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 STK11IPQ8N1F8 1099 aa19.58■□□□□ 0.72
VPS29-207ENST00000549970 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
VPS29-207ENST00000549970 MINDY4BA8MYZ0 360 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 MX1P20591 662 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 RGS2P41220 211 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 LRRFIP1Q32MZ4 808 aaKnown RBP19.57■□□□□ 0.72
VPS29-207ENST00000549970 MORN1Q5T089 497 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 ANKRD45Q5TZF3 282 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 DPF3Q92784 378 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 FSD1Q9BTV5 496 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 SH2D4AQ9H788 454 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 HMX1Q9NP08 348 aaPredicted RBP19.57■□□□□ 0.72
VPS29-207ENST00000549970 TMX2Q9Y320 296 aa19.57■□□□□ 0.72
VPS29-207ENST00000549970 RPTORQ8N122 1335 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 XRCC5P13010 732 aaKnown RBP19.56■□□□□ 0.72
VPS29-207ENST00000549970 ZKSCAN1P17029 563 aaPredicted RBP19.56■□□□□ 0.72
VPS29-207ENST00000549970 COG2Q14746 738 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 GIMAP6Q6P9H5 292 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 LPAR1Q92633 364 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 USP6NLQ92738 828 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 HTATIP2Q9BUP3 242 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 VCPKMTQ9H867 229 aa19.56■□□□□ 0.72
VPS29-207ENST00000549970 EPB41L4AQ9HCS5 686 aaPredicted RBP19.56■□□□□ 0.72
VPS29-207ENST00000549970 APPP05067 770 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 EEF2P13639 858 aaKnown RBP19.55■□□□□ 0.72
VPS29-207ENST00000549970 PRKAR2AP13861 404 aaKnown RBP19.55■□□□□ 0.72
VPS29-207ENST00000549970 TDO2P48775 406 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 CCL14Q16627 93 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
VPS29-207ENST00000549970 SEC62Q99442 399 aaKnown RBP19.55■□□□□ 0.72
VPS29-207ENST00000549970 APBA2Q99767 749 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 CRISPLD2Q9H0B8 497 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 KANSL2Q9H9L4 492 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 HOXC10Q9NYD6 342 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 RLFQ13129 1914 aa19.55■□□□□ 0.72
VPS29-207ENST00000549970 H0YGN5 161 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 FLOT1O75955 427 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 GNAT2P19087 354 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 MAP2K5Q13163 448 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 MAP3K21Q5TCX8 1036 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
VPS29-207ENST00000549970 MKNK2Q9HBH9 465 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 IVNS1ABPQ9Y6Y0 642 aa19.54■□□□□ 0.72
VPS29-207ENST00000549970 CEP290O15078 2479 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 SALL3Q9BXA9 1300 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 WDR46O15213 610 aaKnown RBP19.53■□□□□ 0.72
VPS29-207ENST00000549970 RAD21O60216 631 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 CAPN2P17655 700 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 RASA1P20936 1047 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 PTPREP23469 700 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 DSG3P32926 999 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 HDAC1Q13547 482 aaPredicted RBP19.53■□□□□ 0.72
VPS29-207ENST00000549970 MOV10L1Q9BXT6 1211 aaKnown RBP19.53■□□□□ 0.72
VPS29-207ENST00000549970 ROBO3Q96MS0 1386 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 A0A0G2JMZ2 1700 aa19.53■□□□□ 0.72
VPS29-207ENST00000549970 SLC15A5A6NIM6 579 aa19.52■□□□□ 0.72
VPS29-207ENST00000549970 PATL2C9JE40 543 aaKnown RBP19.52■□□□□ 0.72
VPS29-207ENST00000549970 CACNB2Q08289 660 aaPredicted RBP19.52■□□□□ 0.72
VPS29-207ENST00000549970 PLS1Q14651 629 aa19.52■□□□□ 0.72
VPS29-207ENST00000549970 DIS3LQ8TF46 1054 aaKnown RBP19.52■□□□□ 0.72
VPS29-207ENST00000549970 ATG4CQ96DT6 458 aa19.52■□□□□ 0.72
VPS29-207ENST00000549970 PAWRQ96IZ0 340 aaKnown RBP19.52■□□□□ 0.72
VPS29-207ENST00000549970 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.52■□□□□ 0.72
VPS29-207ENST00000549970 SPATC1LQ9H0A9 340 aa19.52■□□□□ 0.72
VPS29-207ENST00000549970 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
VPS29-207ENST00000549970 GRB14Q14449 540 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 ZMYM1Q5SVZ6 1142 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 IFNL3Q8IZI9 196 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 MB21D1Q8N884 522 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 GOPCQ9HD26 462 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 PARP14Q460N5 1801 aa19.51■□□□□ 0.71
VPS29-207ENST00000549970 PRDM1O75626 825 aa19.5■□□□□ 0.71
VPS29-207ENST00000549970 ERCC3P19447 782 aa19.5■□□□□ 0.71
VPS29-207ENST00000549970 CCND3P30281 292 aaPredicted RBP19.5■□□□□ 0.71
VPS29-207ENST00000549970 HABP4Q5JVS0 413 aaKnown RBP19.5■□□□□ 0.71
VPS29-207ENST00000549970 NECAB2Q7Z6G3 386 aa19.5■□□□□ 0.71
VPS29-207ENST00000549970 NACAP1Q9BZK3 213 aa19.5■□□□□ 0.71
VPS29-207ENST00000549970 FLRT1Q9NZU1 646 aa19.5■□□□□ 0.71
VPS29-207ENST00000549970 FAM83BQ5T0W9 1011 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 CCDC129Q6ZRS4 1044 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 NCAPG2Q86XI2 1143 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 ZNF444Q8N0Y2 327 aaPredicted RBP19.49■□□□□ 0.71
VPS29-207ENST00000549970 ANKLE1Q8NAG6 615 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 NPLOC4Q8TAT6 608 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 NAPBQ9H115 298 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 FBXO28Q9NVF7 368 aa19.49■□□□□ 0.71
VPS29-207ENST00000549970 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
VPS29-207ENST00000549970 ADORA2AP29274 412 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 PDE1AP54750 535 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 MFSD14CQ5VZR4 134 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 DPP9Q86TI2 863 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 SHCBP1Q8NEM2 672 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 EVI5LQ96CN4 794 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 ZNF287Q9HBT7 754 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 STAP2Q9UGK3 403 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 OGDHLQ9ULD0 1010 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
VPS29-207ENST00000549970 COL11A1P12107 1806 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms