RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 APAF1O14727 1248 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 ASNSP08243 561 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 ID4P47928 161 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 LEXMQ3ZCV2 418 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 TSPYL6Q8N831 410 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 UBE2ZQ9H832 354 aaPredicted RBP10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 BTBD7Q9P203 1132 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 BAHCC1Q9P281 2608 aa10.35□□□□□ -0.75
SMARCD1-207ENST00000549526 GAKO14976 1311 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 KMT2BQ9UMN6 2715 aaPredicted RBP10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 TLR3O15455 904 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 COBLO75128 1261 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 CDK7P50613 346 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 TCF15Q12870 199 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 GRB10Q13322 594 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 KCNA10Q16322 511 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 GLT1D1Q96MS3 346 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 UPF3BQ9BZI7 483 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 RFX7Q2KHR2 1363 aa10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 ZNFX1Q9P2E3 1918 aaKnown RBP10.34□□□□□ -0.75
SMARCD1-207ENST00000549526 ZNF536O15090 1300 aa10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 GRXCR2A6NFK2 248 aa10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 BTDP43251 543 aa10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 PUM3Q15397 648 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 RPUSD2Q8IZ73 545 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 ATOH1Q92858 354 aaPredicted RBP10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 HERC5Q9UII4 1024 aaKnown RBP10.33□□□□□ -0.76
SMARCD1-207ENST00000549526 MOXD2PA6NHM9 499 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 GRM8O00222 908 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 CCL23P55773 120 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 JAG1P78504 1218 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 TAP1Q03518 808 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 FLIIQ13045 1269 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 ZYXQ15942 572 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 DZIP1Q86YF9 867 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 VGLL2Q8N8G2 317 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 LENG1Q96BZ8 264 aaPredicted RBP10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 MAML3Q96JK9 1138 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 HIPK3Q9H422 1215 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 GNL3LQ9NVN8 582 aaKnown RBP10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 C9orf78Q9NZ63 289 aaPredicted RBP10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 ELP1O95163 1332 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
SMARCD1-207ENST00000549526 ARVCFO00192 962 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 LPXNO60711 386 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 ADAMTS4O75173 837 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 RGS20O76081 388 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 CALD1Q05682 793 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 PKN1Q16512 942 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 IRF2BPLQ9H1B7 796 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 EPG5Q9HCE0 2579 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 SALL1Q9NSC2 1324 aa10.31□□□□□ -0.76
SMARCD1-207ENST00000549526 ZNF236Q9UL36 1845 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 CDK5RAP2Q96SN8 1893 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 AKR1A1P14550 325 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 TAL1P17542 331 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 FGFR2P21802 821 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 SHROOM1Q2M3G4 852 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 LBX2Q6XYB7 198 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 SUGP1Q8IWZ8 645 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 ZGPATQ8N5A5 531 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 FAM163AQ96GL9 167 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 FEZ1Q99689 392 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 LMCD1Q9NZU5 365 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 ABCF2Q9UG63 623 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 MYO15AQ9UKN7 3530 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 UMODL1Q5DID0 1318 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 SYNRGQ9UMZ2 1314 aa10.3□□□□□ -0.76
SMARCD1-207ENST00000549526 COL4A4P53420 1690 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-207ENST00000549526 A0A0U1RQG5 324 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-207ENST00000549526 MED19A0JLT2 244 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-207ENST00000549526 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms