RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 THSD7BQ9C0I4 1608 aa24.79■■□□□ 1.56
CACNB3-210ENST00000548874 LOC285556D6RIA3 1793 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 TESPA1A2RU30 521 aaPredicted RBP24.78■■□□□ 1.56
CACNB3-210ENST00000548874 SH2B2O14492 632 aaPredicted RBP24.78■■□□□ 1.56
CACNB3-210ENST00000548874 TOP1P11387 765 aaKnown RBP24.78■■□□□ 1.56
CACNB3-210ENST00000548874 USP14P54578 494 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 HMGCS2P54868 508 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 USP17L2Q6R6M4 530 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 RUFY3Q7L099 469 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 ZIC5Q96T25 663 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 VCPKMTQ9H867 229 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 EMILIN3Q9NT22 766 aa24.78■■□□□ 1.56
CACNB3-210ENST00000548874 ERICH2A1L162 156 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 MANSC4A6NHS7 340 aaPredicted RBP24.77■■□□□ 1.56
CACNB3-210ENST00000548874 CETPP11597 493 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 GRM1Q13255 1194 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 TMEM67Q5HYA8 995 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 LRRC47Q8N1G4 583 aaKnown RBP24.77■■□□□ 1.56
CACNB3-210ENST00000548874 BRI3BPQ8WY22 251 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 TCEANC2Q96MN5 208 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 UPF3BQ9BZI7 483 aaKnown RBP24.77■■□□□ 1.56
CACNB3-210ENST00000548874 LY9Q9HBG7 655 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 GPHNQ9NQX3 736 aaPredicted RBP24.77■■□□□ 1.56
CACNB3-210ENST00000548874 CYP46A1Q9Y6A2 500 aa24.77■■□□□ 1.56
CACNB3-210ENST00000548874 AOC2O75106 756 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 KIF23Q02241 960 aaPredicted RBP24.76■■□□□ 1.55
CACNB3-210ENST00000548874 DGKZQ13574 1117 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 WTAPQ15007 396 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 KIAA1755Q5JYT7 1200 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 IFIT1BQ5T764 474 aaKnown RBP24.76■■□□□ 1.55
CACNB3-210ENST00000548874 FBXL16Q8N461 479 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 PROCA1Q8NCQ7 364 aaPredicted RBP24.76■■□□□ 1.55
CACNB3-210ENST00000548874 GMCL1P1Q8NEA9 526 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 LRRC2Q9BYS8 371 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 SENP2Q9HC62 589 aa24.76■■□□□ 1.55
CACNB3-210ENST00000548874 CCL15-CCL14A0A0B4J2E2 113 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 LIFRP42702 1097 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 ZYXQ15942 572 aaKnown RBP24.75■■□□□ 1.55
CACNB3-210ENST00000548874 CCL15Q16663 113 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 FASTKD5Q7L8L6 764 aaKnown RBP24.75■■□□□ 1.55
CACNB3-210ENST00000548874 LPAR1Q92633 364 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 AGXT2Q9BYV1 514 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 GOPCQ9HD26 462 aa24.75■■□□□ 1.55
CACNB3-210ENST00000548874 F5H6K3 240 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 MAP2K2P36507 400 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 INHBEP58166 350 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 KLRC3Q07444 240 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 KAT14Q9H8E8 782 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 TMOD4Q9NZQ9 345 aa24.74■■□□□ 1.55
CACNB3-210ENST00000548874 NDUFB10O96000 172 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 GPAT2Q6NUI2 795 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 SGMS1Q86VZ5 419 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 TMTC2Q8N394 836 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 DNAJC5GQ8N7S2 189 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 PNMA1Q8ND90 353 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 PTPN18Q99952 460 aa24.73■■□□□ 1.55
CACNB3-210ENST00000548874 VCAM1P19320 739 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 TM4SF4P48230 202 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 SREBF2Q12772 1141 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 GADL1Q6ZQY3 521 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 Q6ZUG5 572 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 REM2Q8IYK8 340 aaPredicted RBP24.72■■□□□ 1.55
CACNB3-210ENST00000548874 AGTPBP1Q9UPW5 1226 aa24.72■■□□□ 1.55
CACNB3-210ENST00000548874 TREML2Q5T2D2 321 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 SLFN13Q68D06 897 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 ANKRD23Q86SG2 305 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 SPICE1Q8N0Z3 855 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 GMCL1Q96IK5 515 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 ALDH8A1Q9H2A2 487 aaPredicted RBP24.71■■□□□ 1.55
CACNB3-210ENST00000548874 PDRG1Q9NUG6 133 aa24.71■■□□□ 1.55
CACNB3-210ENST00000548874 BTBD19C9JJ37 291 aa24.7■■□□□ 1.54
CACNB3-210ENST00000548874 IGF2BP3O00425 579 aaKnown RBP eCLIP24.7■■□□□ 1.54
CACNB3-210ENST00000548874 WDR46O15213 610 aaKnown RBP24.7■■□□□ 1.54
CACNB3-210ENST00000548874 SNHG28P0DPA3 235 aa24.7■■□□□ 1.54
CACNB3-210ENST00000548874 PDHBP11177 359 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 HOXA7P31268 230 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-210ENST00000548874 TOB2Q14106 344 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-210ENST00000548874 RASGRP2Q7LDG7 609 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 IFNL1Q8IU54 200 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 FAM43AQ8N2R8 423 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 DCAF4Q8WV16 495 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 ZCCHC17Q9NP64 241 aaKnown RBP24.69■■□□□ 1.54
CACNB3-210ENST00000548874 SLC45A1Q9Y2W3 748 aa24.69■■□□□ 1.54
CACNB3-210ENST00000548874 RAD21O60216 631 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 NEK4P51957 841 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 FGD1P98174 961 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 TROAPQ12815 778 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 RABEP1Q15276 862 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 ZNF654Q8IZM8 581 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 BRF1Q92994 677 aa24.68■■□□□ 1.54
CACNB3-210ENST00000548874 NUP88Q99567 741 aaPredicted RBP24.68■■□□□ 1.54
CACNB3-210ENST00000548874 RPAP3Q9H6T3 665 aaPredicted RBP24.68■■□□□ 1.54
CACNB3-210ENST00000548874 CCDC69A6NI79 296 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 DDAH1O94760 285 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 EVCP57679 992 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 FAM83BQ5T0W9 1011 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 NFXL1Q6ZNB6 911 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 CATIPQ7Z7H3 387 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 BRPF3Q9ULD4 1205 aa24.67■■□□□ 1.54
CACNB3-210ENST00000548874 USP17L15C9J2P7 530 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms