RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
HDAC7-226ENST00000547259 NAPBQ9H115 298 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 GJD2Q9UKL4 321 aa14.34□□□□□ -0.11
HDAC7-226ENST00000547259 FOXP2O15409 715 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 BMP8BP34820 402 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 PTH1RQ03431 593 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 EPB41L4AQ9HCS5 686 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-226ENST00000547259 DCP1AQ9NPI6 582 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-226ENST00000547259 ZMYM6O95789 1325 aa14.33□□□□□ -0.12
HDAC7-226ENST00000547259 SLURP2P0DP57 97 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 HERVK_113P62684 666 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 MTMR2Q13614 643 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 MCM9Q9NXL9 1143 aa14.32□□□□□ -0.12
HDAC7-226ENST00000547259 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-226ENST00000547259 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-226ENST00000547259 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
HDAC7-226ENST00000547259 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
HDAC7-226ENST00000547259 SEC24BO95487 1268 aa14.31□□□□□ -0.12
HDAC7-226ENST00000547259 CCNA1P78396 465 aa14.31□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
HDAC7-226ENST00000547259 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
HDAC7-226ENST00000547259 BACH2Q9BYV9 841 aa14.31□□□□□ -0.12
HDAC7-226ENST00000547259 CWC22Q9HCG8 908 aaKnown RBP14.31□□□□□ -0.12
HDAC7-226ENST00000547259 RBM8AQ9Y5S9 174 aaKnown RBP14.31□□□□□ -0.12
HDAC7-226ENST00000547259 POLR3DP05423 398 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-226ENST00000547259 RGS2P41220 211 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 USP14P54578 494 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 ALX1Q15699 326 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 MAP4K1Q92918 833 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
HDAC7-226ENST00000547259 CTNNA3Q9UI47 895 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 OGDHLQ9ULD0 1010 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 PALD1Q9ULE6 856 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 ZBTB21Q9ULJ3 1066 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
HDAC7-226ENST00000547259 ALPK3Q96L96 1907 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 MINDY4BA8MYZ0 360 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L21D6R901 530 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 EPB41L2O43491 1005 aaKnown RBP14.29□□□□□ -0.12
HDAC7-226ENST00000547259 FGAP02671 866 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-226ENST00000547259 CYP2B6P20813 491 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 MCCP23508 829 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 ERVK-24P63145 666 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 RRP1BQ14684 758 aaKnown RBP14.29□□□□□ -0.12
HDAC7-226ENST00000547259 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
HDAC7-226ENST00000547259 MAP3K21Q5TCX8 1036 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 TTC6Q86TZ1 520 aa14.29□□□□□ -0.12
HDAC7-226ENST00000547259 CYP2D7A0A087X1C5 515 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L15C9J2P7 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L13C9JLJ4 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L11C9JVI0 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L18D6R9N7 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L22D6RA61 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L17D6RBQ6 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L19D6RCP7 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L20D6RJB6 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 PLXNB2O15031 1838 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 CYP2D6P10635 497 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
HDAC7-226ENST00000547259 HAND2P61296 217 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 PPARAQ07869 468 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 USP17L24Q0WX57 530 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 PLEKHH3Q7Z736 793 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 TRIB2Q92519 343 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 GDF15Q99988 308 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 EHD4Q9H223 541 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 CABP5Q9NP86 173 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 RBPJLQ9UBG7 517 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 SERPINB13Q9UIV8 391 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
HDAC7-226ENST00000547259 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.12
HDAC7-226ENST00000547259 ZNF213O14771 459 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 C12orf60Q5U649 245 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 RNF20Q5VTR2 975 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 C12orf42Q96LP6 360 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 FEZ1Q99689 392 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 USP26Q9BXU7 913 aa14.27□□□□□ -0.13
HDAC7-226ENST00000547259 SLC27A2O14975 620 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 MSCO60682 206 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 GDF11O95390 407 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
HDAC7-226ENST00000547259 EVX2Q03828 476 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 NECTIN1Q15223 517 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 MFSD14CQ5VZR4 134 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 CREB3L3Q68CJ9 461 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms