RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C2orf69Q8N8R5 385 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 TMX2Q9Y320 296 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 TRAF5O00463 557 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 KIF3CO14782 793 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 LARGE1O95461 756 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 ITGBL1O95965 494 aaPredicted RBP18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 PTPRAP18433 802 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 YY1P25490 414 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 SHROOM1Q2M3G4 852 aaPredicted RBP18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 CLEC10AQ8IUN9 316 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 GMCL1P1Q8NEA9 526 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 WDR18Q9BV38 432 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 ZNF408Q9H9D4 720 aa18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 GBA2Q9HCG7 927 aaPredicted RBP18.46■□□□□ 0.55
TRAFD1-203ENST00000547063 USP14P54578 494 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 SCRN1Q12765 414 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 VGLL4Q14135 290 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 GRM4Q14833 912 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 SIAH1Q8IUQ4 282 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 LRRC47Q8N1G4 583 aaKnown RBP18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 RBM46Q8TBY0 533 aaKnown RBP18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 FEZ1Q99689 392 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 LZTS2Q9BRK4 669 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 MYL10Q9BUA6 226 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 TRPM7Q96QT4 1865 aa18.45■□□□□ 0.54
TRAFD1-203ENST00000547063 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 TOMM70O94826 608 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 CELF2O95319 508 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 LDLRAD1Q5T700 205 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 ERO1BQ86YB8 467 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 DCAF4Q8WV16 495 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 CWC22Q9HCG8 908 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 FZD1Q9UP38 647 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 OTOFQ9HC10 1997 aa18.44■□□□□ 0.54
TRAFD1-203ENST00000547063 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 F5H6K3 240 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 PDHBP11177 359 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 RXRAP19793 462 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 PPATQ06203 517 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 KLRC3Q07444 240 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 SLFN13Q68D06 897 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 LPAR1Q92633 364 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 VCPKMTQ9H867 229 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 NCOA5Q9HCD5 579 aaKnown RBP18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 SMC3Q9UQE7 1217 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 ZHX2Q9Y6X8 837 aa18.43■□□□□ 0.54
TRAFD1-203ENST00000547063 A0A1W2PRG0 241 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 RAD21O60216 631 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 IFNAR1P17181 557 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 SLC1A4P43007 532 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 RAB11FIP4Q86YS3 637 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 CCDC144CPQ8IYA2 1237 aa18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
TRAFD1-203ENST00000547063 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 PDIA4P13667 645 aaKnown RBP18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 ADD1P35611 737 aaKnown RBP18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 ECE1P42892 770 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 SLC4A3P48751 1232 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 BACE1P56817 501 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 CCDC96Q2M329 555 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 TRIM22Q8IYM9 498 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 ACER1Q8TDN7 264 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 SLC10A4Q96EP9 437 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 MAD2L2Q9UI95 211 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
TRAFD1-203ENST00000547063 SPDYE5A6NIY4 337 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 UBE2Q2LH0YL09 131 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 NDUFB10O96000 172 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 CDC27P30260 824 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 AKAP17AQ02040 695 aaKnown RBP18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 FSTL1Q12841 308 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 SPP2Q13103 211 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 TMTC3Q6ZXV5 915 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 NSUN7Q8NE18 718 aaKnown RBP18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
TRAFD1-203ENST00000547063 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms