RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
COL2A1-209ENST00000546974 APBA2Q99767 749 aa17.28■□□□□ 0.36
COL2A1-209ENST00000546974 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
COL2A1-209ENST00000546974 PCDH10Q9P2E7 1040 aa17.28■□□□□ 0.36
COL2A1-209ENST00000546974 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
COL2A1-209ENST00000546974 NR2E3Q9Y5X4 410 aa17.28■□□□□ 0.36
COL2A1-209ENST00000546974 TRIOBPQ9H2D6 2365 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 SLC15A5A6NIM6 579 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 SMIM22K7EJ46 135 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 PTPREP23469 700 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 ICA1Q05084 483 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
COL2A1-209ENST00000546974 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
COL2A1-209ENST00000546974 OGDHLQ9ULD0 1010 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 PCDHB15Q9Y5E8 787 aa17.27■□□□□ 0.36
COL2A1-209ENST00000546974 ALPK3Q96L96 1907 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
COL2A1-209ENST00000546974 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
COL2A1-209ENST00000546974 CCL14Q16627 93 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 APPBP2Q92624 585 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
COL2A1-209ENST00000546974 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 RNF113AO15541 343 aaKnown RBP17.25■□□□□ 0.35
COL2A1-209ENST00000546974 EVI5O60447 810 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 HOXC6P09630 235 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 DSG3P32926 999 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 GRB14Q14449 540 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 CLEC10AQ8IUN9 316 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 DIS3LQ8TF46 1054 aaKnown RBP17.25■□□□□ 0.35
COL2A1-209ENST00000546974 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 KANSL2Q9H9L4 492 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 IVNS1ABPQ9Y6Y0 642 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
COL2A1-209ENST00000546974 A0A0G2JMZ2 1700 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 ERC2O15083 957 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
COL2A1-209ENST00000546974 MNX1P50219 401 aaPredicted RBP17.24■□□□□ 0.35
COL2A1-209ENST00000546974 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
COL2A1-209ENST00000546974 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
COL2A1-209ENST00000546974 CHRDL2Q6WN34 429 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
COL2A1-209ENST00000546974 NBPF3Q9H094 633 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 DNAH12Q6ZR08 3092 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 SZT2Q5T011 3432 aa17.24■□□□□ 0.35
COL2A1-209ENST00000546974 STRNO43815 780 aa17.23■□□□□ 0.35
COL2A1-209ENST00000546974 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
COL2A1-209ENST00000546974 GNAT2P19087 354 aa17.23■□□□□ 0.35
COL2A1-209ENST00000546974 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL2A1-209ENST00000546974 MFSD14CQ5VZR4 134 aa17.23■□□□□ 0.35
COL2A1-209ENST00000546974 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
COL2A1-209ENST00000546974 SHCBP1Q8NEM2 672 aa17.23■□□□□ 0.35
COL2A1-209ENST00000546974 GREB1LQ9C091 1923 aaPredicted RBP17.23■□□□□ 0.35
COL2A1-209ENST00000546974 ZNFX1Q9P2E3 1918 aaKnown RBP17.23■□□□□ 0.35
COL2A1-209ENST00000546974 ZNF236Q9UL36 1845 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 GPAA1O43292 621 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 FLOT1O75955 427 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 CCND3P30281 292 aaPredicted RBP17.22■□□□□ 0.35
COL2A1-209ENST00000546974 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 C11orf49Q9H6J7 331 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
COL2A1-209ENST00000546974 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 MINDY4BA8MYZ0 360 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 ERCC3P19447 782 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 LHX8Q68G74 356 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 NPLOC4Q8TAT6 608 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL2A1-209ENST00000546974 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 MKNK2Q9HBH9 465 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 RBM27Q9P2N5 1060 aaKnown RBP17.21■□□□□ 0.35
COL2A1-209ENST00000546974 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
COL2A1-209ENST00000546974 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
COL2A1-209ENST00000546974 PATL2C9JE40 543 aaKnown RBP17.2■□□□□ 0.34
COL2A1-209ENST00000546974 M0R2C6 588 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 IGHA2P01877 340 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 RASA1P20936 1047 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 ADORA2AP29274 412 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 DPP9Q86TI2 863 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 MROH8Q9H579 483 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
COL2A1-209ENST00000546974 ADAMTS5Q9UNA0 930 aa17.2■□□□□ 0.34
COL2A1-209ENST00000546974 TDO2P48775 406 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 PLS1Q14651 629 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 OLFML2BQ68BL8 750 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 ABRAQ8N0Z2 381 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
COL2A1-209ENST00000546974 ZNF287Q9HBT7 754 aa17.19■□□□□ 0.34
COL2A1-209ENST00000546974 NYAP2Q9P242 653 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms