RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
PRKDC-211ENST00000546304 MCAMP43121 646 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 GMPSP49915 693 aaPredicted RBP7.71□□□□□ -1.18
PRKDC-211ENST00000546304 SCNN1DP51172 638 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 TNIP1Q15025 636 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 MFSD14BQ5SR56 506 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 TAS1R3Q7RTX0 852 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.18
PRKDC-211ENST00000546304 GMCL1Q96IK5 515 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 ZNF512BQ96KM6 892 aaPredicted RBP7.71□□□□□ -1.18
PRKDC-211ENST00000546304 KCNQ5Q9NR82 932 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 ECHDC1Q9NTX5 307 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 DENND2AQ9ULE3 1009 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 AOX1Q06278 1338 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 TTC41PQ6P2S7 1318 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 FOCADQ5VW36 1801 aa7.71□□□□□ -1.18
PRKDC-211ENST00000546304 DDNO94850 711 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 VIL1P09327 827 aaKnown RBP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 RPS12P25398 132 aaKnown RBP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 FKBP1AP62942 108 aaKnown RBP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 EML3Q32P44 896 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 TTLL5Q6EMB2 1281 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 SV2AQ7L0J3 742 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 CERS5Q8N5B7 392 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 SPATA5Q8NB90 893 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 WDR66Q8TBY9 1149 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 TBC1D22AQ8WUA7 517 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-211ENST00000546304 MXD3Q9BW11 206 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 HMG20BQ9P0W2 317 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 SALL1Q9NSC2 1324 aa7.7□□□□□ -1.18
PRKDC-211ENST00000546304 NAV1Q8NEY1 1877 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 IQCA1LA6NCM1 817 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 ERC2O15083 957 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 INHAP05111 366 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 ATP5JP18859 108 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 YY1P25490 414 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 PRDX5P30044 214 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 KIAA0825Q8IV33 1275 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 ZGPATQ8N5A5 531 aaKnown RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 AGBL3Q8NEM8 1001 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 ZNF526Q8TF50 670 aaPredicted RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 GMLQ99445 158 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 DNAJC2Q99543 621 aaKnown RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 GPRC5DQ9NZD1 345 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 NOD1Q9Y239 953 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 MAST3O60307 1309 aa7.69□□□□□ -1.18
PRKDC-211ENST00000546304 DDX60LQ5H9U9 1706 aaKnown RBP7.69□□□□□ -1.18
PRKDC-211ENST00000546304 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 F8W031 263 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 GLRX3O76003 335 aaKnown RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 STAU1O95793 577 aaKnown RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 ZAP70P43403 619 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 PDE1AP54750 535 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 GDF10P55107 478 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 KRT76Q01546 638 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 GRIK5Q16478 980 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 DZIP1Q86YF9 867 aaKnown RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 TRIM22Q8IYM9 498 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 C16orf71Q8IYS4 520 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 ZSCAN1Q8NBB4 408 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 DPF2Q92785 391 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 HAUS7Q99871 368 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 BOLA2Q9H3K6 86 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 ABCF2Q9UG63 623 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 STAP2Q9UGK3 403 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
PRKDC-211ENST00000546304 POLR2AP24928 1970 aaKnown RBP7.68□□□□□ -1.18
PRKDC-211ENST00000546304 SHTN1A0MZ66 631 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 CDC14CA4D256 554 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 GOLIM4O00461 696 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 CYP2E1P05181 493 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 LDHBP07195 334 aaKnown RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 ZNF280AP59817 542 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 NCOA4Q13772 614 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 TTF1Q15361 905 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 KIF4BQ2VIQ3 1234 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 GNASQ5JWF2 1037 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 SPTY2D1Q68D10 685 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 OGFOD1Q8N543 542 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 EDC3Q96F86 508 aaKnown RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 COL25A1Q9BXS0 654 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 NMRK2Q9NPI5 230 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 TIMMDC1Q9NPL8 285 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 PIH1D3Q9NQM4 214 aaKnown RBP7.67□□□□□ -1.18
PRKDC-211ENST00000546304 PAG1Q9NWQ8 432 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 HACL1Q9UJ83 578 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 HDAC9Q9UKV0 1011 aa7.67□□□□□ -1.18
PRKDC-211ENST00000546304 TTF2Q9UNY4 1162 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms