RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ERC2O15083 957 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 ZKSCAN1P17029 563 aaPredicted RBP27.27■■□□□ 1.96
CHD4-214ENST00000545942 COG2Q14746 738 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 HABP4Q5JVS0 413 aaKnown RBP27.27■■□□□ 1.96
CHD4-214ENST00000545942 GIMAP6Q6P9H5 292 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 CLEC10AQ8IUN9 316 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 SIAH1Q8IUQ4 282 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 APBA2Q99767 749 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 TMX2Q9Y320 296 aa27.27■■□□□ 1.96
CHD4-214ENST00000545942 BAZ2AQ9UIF9 1905 aaKnown RBP27.27■■□□□ 1.96
CHD4-214ENST00000545942 PRKAR2AP13861 404 aaKnown RBP27.26■■□□□ 1.95
CHD4-214ENST00000545942 LRRFIP1Q32MZ4 808 aaKnown RBP27.26■■□□□ 1.95
CHD4-214ENST00000545942 MAP3K21Q5TCX8 1036 aa27.26■■□□□ 1.95
CHD4-214ENST00000545942 WDR78Q5VTH9 848 aa27.26■■□□□ 1.95
CHD4-214ENST00000545942 GSG1L2A8MUP6 293 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 MAP2K5Q13163 448 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 SBK1Q52WX2 424 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 KIAA1755Q5JYT7 1200 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 VCPKMTQ9H867 229 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 KANSL2Q9H9L4 492 aa27.25■■□□□ 1.95
CHD4-214ENST00000545942 PI4K2BQ8TCG2 481 aa27.24■■□□□ 1.95
CHD4-214ENST00000545942 IVNS1ABPQ9Y6Y0 642 aa27.24■■□□□ 1.95
CHD4-214ENST00000545942 SLC15A5A6NIM6 579 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 GPAA1O43292 621 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 GNAT2P19087 354 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 CCL14Q16627 93 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 SPICE1Q8N0Z3 855 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 ANKLE1Q8NAG6 615 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 OTUD7AQ8TE49 926 aaPredicted RBP27.23■■□□□ 1.95
CHD4-214ENST00000545942 CRBNQ96SW2 442 aa27.23■■□□□ 1.95
CHD4-214ENST00000545942 EEF2P13639 858 aaKnown RBP27.22■■□□□ 1.95
CHD4-214ENST00000545942 PTPREP23469 700 aa27.22■■□□□ 1.95
CHD4-214ENST00000545942 MB21D1Q8N884 522 aa27.22■■□□□ 1.95
CHD4-214ENST00000545942 PAWRQ96IZ0 340 aaKnown RBP27.22■■□□□ 1.95
CHD4-214ENST00000545942 WDR46O15213 610 aaKnown RBP27.21■■□□□ 1.95
CHD4-214ENST00000545942 FLOT1O75955 427 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 MX1P20591 662 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 ATP2B2Q01814 1243 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 CACNB2Q08289 660 aaPredicted RBP27.21■■□□□ 1.95
CHD4-214ENST00000545942 NECAB2Q7Z6G3 386 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 ZBTB47Q9UFB7 747 aaPredicted RBP27.21■■□□□ 1.95
CHD4-214ENST00000545942 NR2E3Q9Y5X4 410 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 MYH8P13535 1937 aa27.21■■□□□ 1.95
CHD4-214ENST00000545942 DSG3P32926 999 aa27.2■■□□□ 1.95
CHD4-214ENST00000545942 GRB14Q14449 540 aa27.2■■□□□ 1.95
CHD4-214ENST00000545942 MOV10L1Q9BXT6 1211 aaKnown RBP27.2■■□□□ 1.95
CHD4-214ENST00000545942 SPATC1LQ9H0A9 340 aa27.2■■□□□ 1.95
CHD4-214ENST00000545942 MKNK2Q9HBH9 465 aa27.2■■□□□ 1.95
CHD4-214ENST00000545942 EPB41L4AQ9HCS5 686 aaPredicted RBP27.2■■□□□ 1.95
CHD4-214ENST00000545942 COLQQ9Y215 455 aaPredicted RBP27.2■■□□□ 1.95
CHD4-214ENST00000545942 ROBO3Q96MS0 1386 aa27.2■■□□□ 1.94
CHD4-214ENST00000545942 MINDY4BA8MYZ0 360 aa27.19■■□□□ 1.94
CHD4-214ENST00000545942 M0R2C6 588 aa27.19■■□□□ 1.94
CHD4-214ENST00000545942 TDO2P48775 406 aa27.19■■□□□ 1.94
CHD4-214ENST00000545942 DIS3LQ8TF46 1054 aaKnown RBP27.19■■□□□ 1.94
CHD4-214ENST00000545942 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
CHD4-214ENST00000545942 FSD1Q9BTV5 496 aa27.19■■□□□ 1.94
CHD4-214ENST00000545942 OGDHLQ9ULD0 1010 aa27.19■■□□□ 1.94
CHD4-214ENST00000545942 APPP05067 770 aa27.18■■□□□ 1.94
CHD4-214ENST00000545942 HOXC6P09630 235 aa27.18■■□□□ 1.94
CHD4-214ENST00000545942 RASA1P20936 1047 aa27.18■■□□□ 1.94
CHD4-214ENST00000545942 SHCBP1Q8NEM2 672 aa27.18■■□□□ 1.94
CHD4-214ENST00000545942 GOPCQ9HD26 462 aa27.18■■□□□ 1.94
CHD4-214ENST00000545942 PATL2C9JE40 543 aaKnown RBP27.17■■□□□ 1.94
CHD4-214ENST00000545942 EVI5O60447 810 aa27.17■■□□□ 1.94
CHD4-214ENST00000545942 MFSD14CQ5VZR4 134 aa27.17■■□□□ 1.94
CHD4-214ENST00000545942 STK11IPQ8N1F8 1099 aa27.17■■□□□ 1.94
CHD4-214ENST00000545942 ATG4CQ96DT6 458 aa27.17■■□□□ 1.94
CHD4-214ENST00000545942 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.17■■□□□ 1.94
CHD4-214ENST00000545942 SALL3Q9BXA9 1300 aa27.17■■□□□ 1.94
CHD4-214ENST00000545942 STRNO43815 780 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 ERCC3P19447 782 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 ANKRD45Q5TZF3 282 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 NBPF3Q9H094 633 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 ZNF287Q9HBT7 754 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 FLRT1Q9NZU1 646 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 CCND3P30281 292 aaPredicted RBP27.16■■□□□ 1.94
CHD4-214ENST00000545942 HDAC1Q13547 482 aaPredicted RBP27.16■■□□□ 1.94
CHD4-214ENST00000545942 PLS1Q14651 629 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 IFNL3Q8IZI9 196 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 SEC62Q99442 399 aaKnown RBP27.16■■□□□ 1.94
CHD4-214ENST00000545942 NACAP1Q9BZK3 213 aa27.16■■□□□ 1.94
CHD4-214ENST00000545942 A0A0G2JMZ2 1700 aa27.15■■□□□ 1.94
CHD4-214ENST00000545942 MNX1P50219 401 aaPredicted RBP27.15■■□□□ 1.94
CHD4-214ENST00000545942 ZMYM1Q5SVZ6 1142 aa27.15■■□□□ 1.94
CHD4-214ENST00000545942 SAMD1Q6SPF0 538 aaPredicted RBP27.15■■□□□ 1.94
CHD4-214ENST00000545942 CHRDL2Q6WN34 429 aa27.15■■□□□ 1.94
CHD4-214ENST00000545942 RLFQ13129 1914 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 RAD21O60216 631 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 ADORA2AP29274 412 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 DPP9Q86TI2 863 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 NPLOC4Q8TAT6 608 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 MROH8Q9H579 483 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 C11orf49Q9H6J7 331 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 NYAP2Q9P242 653 aa27.14■■□□□ 1.93
CHD4-214ENST00000545942 AAMPQ13685 434 aa27.13■■□□□ 1.93
CHD4-214ENST00000545942 LHX8Q68G74 356 aa27.13■■□□□ 1.93
CHD4-214ENST00000545942 NCAPG2Q86XI2 1143 aa27.13■■□□□ 1.93
CHD4-214ENST00000545942 ZNF444Q8N0Y2 327 aaPredicted RBP27.13■■□□□ 1.93
CHD4-214ENST00000545942 FBXO28Q9NVF7 368 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms