RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 NOL10Q9BSC4 688 aaKnown RBP17.95■□□□□ 0.46
LDLR-204ENST00000545707 MAPK8IP1Q9UQF2 711 aa17.95■□□□□ 0.46
LDLR-204ENST00000545707 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
LDLR-204ENST00000545707 GOLGA6L9A6NEM1 432 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 CYP2D6P10635 497 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 MCM7P33993 719 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 FXR1P51114 621 aaKnown RBP eCLIP17.94■□□□□ 0.46
LDLR-204ENST00000545707 IL17AQ16552 155 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 TNFRSF25Q93038 417 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 ADGRG1Q9Y653 693 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 XDHP47989 1333 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 RNF225M0QZC1 329 aaPredicted RBP17.94■□□□□ 0.46
LDLR-204ENST00000545707 CCDC175P0C221 793 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 CDKAL1Q5VV42 579 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 FAM84BQ96KN1 310 aaPredicted RBP17.94■□□□□ 0.46
LDLR-204ENST00000545707 MTRQ99707 1265 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
LDLR-204ENST00000545707 BCORQ6W2J9 1755 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 ZNF804BA4D1E1 1349 aa17.94■□□□□ 0.46
LDLR-204ENST00000545707 PBX1P40424 430 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 ANKRD18AQ8IVF6 992 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 PARD6BQ9BYG5 372 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 VPS16Q9H269 839 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
LDLR-204ENST00000545707 MYH2Q9UKX2 1941 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 FERMT2Q96AC1 680 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 CCDC34Q96HJ3 373 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 GSDMAQ96QA5 445 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 PANX2Q96RD6 677 aa17.93■□□□□ 0.46
LDLR-204ENST00000545707 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
LDLR-204ENST00000545707 PUF60Q9UHX1 559 aaKnown RBP17.93■□□□□ 0.46
LDLR-204ENST00000545707 BCL9LQ86UU0 1499 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 TBC1D8O95759 1140 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 GYPCP04921 128 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 NLRP5P59047 1200 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 CC2D1AQ6P1N0 951 aaPredicted RBP17.92■□□□□ 0.46
LDLR-204ENST00000545707 RSRC2Q7L4I2 434 aaKnown RBP17.92■□□□□ 0.46
LDLR-204ENST00000545707 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 ACRBPQ8NEB7 543 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
LDLR-204ENST00000545707 BRMS1Q9HCU9 246 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 MFAP3LO75121 409 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 PPP2R5BQ15173 497 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 MINPP1Q9UNW1 487 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
LDLR-204ENST00000545707 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
LDLR-204ENST00000545707 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
LDLR-204ENST00000545707 KRT31Q15323 416 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
LDLR-204ENST00000545707 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 RBM28Q9NW13 759 aaKnown RBP17.91■□□□□ 0.46
LDLR-204ENST00000545707 BAZ2AQ9UIF9 1905 aaKnown RBP17.91■□□□□ 0.46
LDLR-204ENST00000545707 E2F4Q16254 413 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 ZNF569Q5MCW4 686 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 CTCFLQ8NI51 663 aaPredicted RBP17.91■□□□□ 0.46
LDLR-204ENST00000545707 RASGRP4Q8TDF6 673 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 TAB2Q9NYJ8 693 aa17.91■□□□□ 0.46
LDLR-204ENST00000545707 N4BP3O15049 544 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 MECOMQ03112 1051 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 FILIP1LQ4L180 1135 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 TAF1P21675 1872 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 KCNQ2O43526 872 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 DDB1Q16531 1140 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
LDLR-204ENST00000545707 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.467e-9■□□□□ 10.9
LDLR-204ENST00000545707 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
LDLR-204ENST00000545707 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 GDAQ9Y2T3 454 aa17.9■□□□□ 0.46
LDLR-204ENST00000545707 MYH6P13533 1939 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 TPM1P09493 284 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 SCG2P13521 617 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 PRDX5P30044 214 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 UBE4AQ14139 1066 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 PDXDC2PQ6P474 469 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 IQUBQ8NA54 791 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 DCP1AQ9NPI6 582 aaPredicted RBP17.89■□□□□ 0.45
LDLR-204ENST00000545707 ERVK-24P63145 666 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 GOLGA1Q92805 767 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 PLIN2Q99541 437 aa17.89■□□□□ 0.45
LDLR-204ENST00000545707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.89■□□□□ 0.458e-10■□□□□ 8.4
LDLR-204ENST00000545707 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 FGRP09769 529 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 CALM1P0DP23 149 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 CALM2P0DP24 149 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 CALM3P0DP25 149 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
LDLR-204ENST00000545707 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
LDLR-204ENST00000545707 PLCH1Q4KWH8 1693 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 PP2D1A8MPX8 630 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 KIF5CO60282 957 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 DDAH1O94760 285 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 BMP15O95972 392 aa17.88■□□□□ 0.45
LDLR-204ENST00000545707 RASGRP2Q7LDG7 609 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms