RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.41
CHD4-213ENST00000545584 CRBNQ96SW2 442 aa23.83■■□□□ 1.41
CHD4-213ENST00000545584 TMX2Q9Y320 296 aa23.83■■□□□ 1.41
CHD4-213ENST00000545584 IVNS1ABPQ9Y6Y0 642 aa23.83■■□□□ 1.41
CHD4-213ENST00000545584 PLXNB2O15031 1838 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 GNAT2P19087 354 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 SBK1Q52WX2 424 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 MORN1Q5T089 497 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 OSBP2Q969R2 916 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 APBA2Q99767 749 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 CRISPLD2Q9H0B8 497 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 KANSL2Q9H9L4 492 aa23.82■■□□□ 1.4
CHD4-213ENST00000545584 GSG1L2A8MUP6 293 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 SMIM22K7EJ46 135 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 GPAA1O43292 621 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 ATP2B2Q01814 1243 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 TRIM32Q13049 653 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 USP6NLQ92738 828 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 VCPKMTQ9H867 229 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 BTBD7Q9P203 1132 aa23.81■■□□□ 1.4
CHD4-213ENST00000545584 MINDY4BA8MYZ0 360 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 H0YGN5 161 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 PRKAR2AP13861 404 aaKnown RBP23.8■■□□□ 1.4
CHD4-213ENST00000545584 MX1P20591 662 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 MAP2K5Q13163 448 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 CLEC10AQ8IUN9 316 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 FSD1Q9BTV5 496 aa23.8■■□□□ 1.4
CHD4-213ENST00000545584 SLC15A5A6NIM6 579 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 APPP05067 770 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 PTPREP23469 700 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 TDO2P48775 406 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 SIAH1Q8IUQ4 282 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 SPICE1Q8N0Z3 855 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 MB21D1Q8N884 522 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 ANKLE1Q8NAG6 615 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 PI4K2BQ8TCG2 481 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 MKNK2Q9HBH9 465 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 NR2E3Q9Y5X4 410 aa23.79■■□□□ 1.4
CHD4-213ENST00000545584 WDR46O15213 610 aaKnown RBP23.78■■□□□ 1.4
CHD4-213ENST00000545584 FLOT1O75955 427 aa23.78■■□□□ 1.4
CHD4-213ENST00000545584 EEF2P13639 858 aaKnown RBP23.78■■□□□ 1.4
CHD4-213ENST00000545584 HABP4Q5JVS0 413 aaKnown RBP23.78■■□□□ 1.4
CHD4-213ENST00000545584 MAP3K21Q5TCX8 1036 aa23.78■■□□□ 1.4
CHD4-213ENST00000545584 ANKRD45Q5TZF3 282 aa23.78■■□□□ 1.4
CHD4-213ENST00000545584 NECAB2Q7Z6G3 386 aa23.78■■□□□ 1.4
CHD4-213ENST00000545584 OTUD7AQ8TE49 926 aaPredicted RBP23.78■■□□□ 1.4
CHD4-213ENST00000545584 ZNF287Q9HBT7 754 aa23.78■■□□□ 1.4
CHD4-213ENST00000545584 DSG3P32926 999 aa23.77■■□□□ 1.4
CHD4-213ENST00000545584 KIAA1755Q5JYT7 1200 aa23.77■■□□□ 1.4
CHD4-213ENST00000545584 STK11IPQ8N1F8 1099 aa23.77■■□□□ 1.4
CHD4-213ENST00000545584 NACAP1Q9BZK3 213 aa23.77■■□□□ 1.4
CHD4-213ENST00000545584 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
CHD4-213ENST00000545584 PATL2C9JE40 543 aaKnown RBP23.76■■□□□ 1.39
CHD4-213ENST00000545584 M0R2C6 588 aa23.76■■□□□ 1.39
CHD4-213ENST00000545584 RAD21O60216 631 aa23.76■■□□□ 1.39
CHD4-213ENST00000545584 CACNB2Q08289 660 aaPredicted RBP23.76■■□□□ 1.39
CHD4-213ENST00000545584 CCL14Q16627 93 aa23.76■■□□□ 1.39
CHD4-213ENST00000545584 MFSD14CQ5VZR4 134 aa23.76■■□□□ 1.39
CHD4-213ENST00000545584 SAMD1Q6SPF0 538 aaPredicted RBP23.76■■□□□ 1.39
CHD4-213ENST00000545584 PAWRQ96IZ0 340 aaKnown RBP23.76■■□□□ 1.39
CHD4-213ENST00000545584 MOV10L1Q9BXT6 1211 aaKnown RBP23.76■■□□□ 1.39
CHD4-213ENST00000545584 SPATC1LQ9H0A9 340 aa23.76■■□□□ 1.39
CHD4-213ENST00000545584 STRNO43815 780 aa23.75■■□□□ 1.39
CHD4-213ENST00000545584 AAMPQ13685 434 aa23.75■■□□□ 1.39
CHD4-213ENST00000545584 GRB14Q14449 540 aa23.75■■□□□ 1.39
CHD4-213ENST00000545584 PLS1Q14651 629 aa23.75■■□□□ 1.39
CHD4-213ENST00000545584 SHCBP1Q8NEM2 672 aa23.75■■□□□ 1.39
CHD4-213ENST00000545584 EVI5O60447 810 aa23.74■■□□□ 1.39
CHD4-213ENST00000545584 RASA1P20936 1047 aa23.74■■□□□ 1.39
CHD4-213ENST00000545584 HDAC1Q13547 482 aaPredicted RBP23.74■■□□□ 1.39
CHD4-213ENST00000545584 IFNL3Q8IZI9 196 aa23.74■■□□□ 1.39
CHD4-213ENST00000545584 ZNF444Q8N0Y2 327 aaPredicted RBP23.74■■□□□ 1.39
CHD4-213ENST00000545584 EPB41L4AQ9HCS5 686 aaPredicted RBP23.74■■□□□ 1.39
CHD4-213ENST00000545584 ROBO3Q96MS0 1386 aa23.74■■□□□ 1.39
CHD4-213ENST00000545584 HOXC6P09630 235 aa23.73■■□□□ 1.39
CHD4-213ENST00000545584 DPP9Q86TI2 863 aa23.73■■□□□ 1.39
CHD4-213ENST00000545584 ATG4CQ96DT6 458 aa23.73■■□□□ 1.39
CHD4-213ENST00000545584 NBPF3Q9H094 633 aa23.73■■□□□ 1.39
CHD4-213ENST00000545584 OGDHLQ9ULD0 1010 aa23.73■■□□□ 1.39
CHD4-213ENST00000545584 COLQQ9Y215 455 aaPredicted RBP23.73■■□□□ 1.39
CHD4-213ENST00000545584 CEP290O15078 2479 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 SLC3A2P08195 630 aaKnown RBP23.72■■□□□ 1.39
CHD4-213ENST00000545584 ERCC3P19447 782 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 ZMYM1Q5SVZ6 1142 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 NCAPG2Q86XI2 1143 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 DIS3LQ8TF46 1054 aaKnown RBP23.72■■□□□ 1.39
CHD4-213ENST00000545584 SEC62Q99442 399 aaKnown RBP23.72■■□□□ 1.39
CHD4-213ENST00000545584 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.72■■□□□ 1.39
CHD4-213ENST00000545584 NAPBQ9H115 298 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 MROH8Q9H579 483 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 SLC5A4Q9NY91 659 aa23.72■■□□□ 1.39
CHD4-213ENST00000545584 CCND3P30281 292 aaPredicted RBP23.71■■□□□ 1.39
CHD4-213ENST00000545584 NYAP2Q9P242 653 aa23.71■■□□□ 1.39
CHD4-213ENST00000545584 RLFQ13129 1914 aa23.71■■□□□ 1.39
CHD4-213ENST00000545584 SALL3Q9BXA9 1300 aa23.7■■□□□ 1.38
CHD4-213ENST00000545584 ADORA2AP29274 412 aa23.7■■□□□ 1.38
CHD4-213ENST00000545584 PDE4BQ07343 736 aa23.7■■□□□ 1.38
CHD4-213ENST00000545584 NPLOC4Q8TAT6 608 aa23.7■■□□□ 1.38
CHD4-213ENST00000545584 EVI5LQ96CN4 794 aa23.7■■□□□ 1.38
CHD4-213ENST00000545584 A0A0G2JMZ2 1700 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms