RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 SEPT2Q15019 361 aa16.29■□□□□ 0.2
TSEN54-203ENST00000545228 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
TSEN54-203ENST00000545228 ZCCHC17Q9NP64 241 aaKnown RBP16.29■□□□□ 0.2
TSEN54-203ENST00000545228 NYAP2Q9P242 653 aa16.29■□□□□ 0.2
TSEN54-203ENST00000545228 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
TSEN54-203ENST00000545228 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
TSEN54-203ENST00000545228 WDR19Q8NEZ3 1342 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 B4E1Z4 1266 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 IRF6O14896 467 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 KDM4AO75164 1064 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 BACE1P56817 501 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 LPAR1Q92633 364 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 TMEM87BQ96K49 555 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 KIAA1683Q9H0B3 1180 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
TSEN54-203ENST00000545228 A0A0G2JLL6 359 aaPredicted RBP16.27■□□□□ 0.2
TSEN54-203ENST00000545228 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 EVX2Q03828 476 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 SPP2Q13103 211 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 PRRT2Q7Z6L0 340 aaPredicted RBP16.27■□□□□ 0.2
TSEN54-203ENST00000545228 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 KCNB2Q92953 911 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 ZNF333Q96JL9 665 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 MTMR4Q9NYA4 1195 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
TSEN54-203ENST00000545228 RBBP6Q7Z6E9 1792 aaKnown RBP16.26■□□□□ 0.19
TSEN54-203ENST00000545228 TLR2O60603 784 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 SLURP2P0DP57 97 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 EN2P19622 333 aaPredicted RBP16.26■□□□□ 0.19
TSEN54-203ENST00000545228 FGD1P98174 961 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 RRP1BQ14684 758 aaKnown RBP16.26■□□□□ 0.19
TSEN54-203ENST00000545228 KIF22Q14807 665 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
TSEN54-203ENST00000545228 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
TSEN54-203ENST00000545228 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
TSEN54-203ENST00000545228 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
TSEN54-203ENST00000545228 MTMR2Q13614 643 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
TSEN54-203ENST00000545228 MKL1Q969V6 931 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 KAT14Q9H8E8 782 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
TSEN54-203ENST00000545228 TNKSO95271 1327 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 IFIT3O14879 490 aaKnown RBP16.24■□□□□ 0.19
TSEN54-203ENST00000545228 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 LACTBP83111 547 aaPredicted RBP16.24■□□□□ 0.19
TSEN54-203ENST00000545228 WTAPQ15007 396 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
TSEN54-203ENST00000545228 GMCL1P1Q8NEA9 526 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 GTF3C2Q8WUA4 911 aaPredicted RBP16.24■□□□□ 0.19
TSEN54-203ENST00000545228 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
TSEN54-203ENST00000545228 VCPKMTQ9H867 229 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 CLIP2Q9UDT6 1046 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
TSEN54-203ENST00000545228 WDR46O15213 610 aaKnown RBP16.23■□□□□ 0.19
TSEN54-203ENST00000545228 PRC1O43663 620 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 GNRH1P01148 92 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 OSBPP22059 807 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 HMGCS2P54868 508 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 ANKRD23Q86SG2 305 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
TSEN54-203ENST00000545228 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
TSEN54-203ENST00000545228 RAD21O60216 631 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
TSEN54-203ENST00000545228 NOVP48745 357 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 RCSD1Q6JBY9 416 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 PARK7Q99497 189 aaKnown RBP16.22■□□□□ 0.19
TSEN54-203ENST00000545228 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.22■□□□□ 0.19
TSEN54-203ENST00000545228 BACH2Q9BYV9 841 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 ARHGAP39Q9C0H5 1083 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 INCENPQ9NQS7 918 aa16.22■□□□□ 0.19
TSEN54-203ENST00000545228 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms