RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 TBX22Q9Y458 520 aa11.46□□□□□ -0.58
PCDH9-204ENST00000544246 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.58
PCDH9-204ENST00000544246 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.58
PCDH9-204ENST00000544246 HAUS1Q96CS2 278 aa11.46□□□□□ -0.58
PCDH9-204ENST00000544246 CCDC124Q96CT7 223 aaKnown RBP11.46□□□□□ -0.58
PCDH9-204ENST00000544246 USP21Q9UK80 565 aa11.46□□□□□ -0.58
PCDH9-204ENST00000544246 IL16Q14005 1332 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 ATP7AQ04656 1500 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 RNF8O76064 485 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 IGHDP01880 384 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 NOP9Q86U38 636 aaKnown RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 HACE1Q8IYU2 909 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 XAGE3Q8WTP9 111 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 CCDC68Q9H2F9 335 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 HOMER3Q9NSC5 361 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 SCHIP1Q9P0W5 487 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 AMFRQ9UKV5 643 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 NCOA1Q15788 1441 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 STAM2O75886 525 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 DEXIO95424 95 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 MYCT1Q8N699 235 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 PARP3Q9Y6F1 533 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 GRM8O00222 908 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 GNGT2O14610 69 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 MYCLP12524 364 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 GNGT1P63211 74 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 NOS1P29475 1434 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 EXOC3O60645 756 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 SAP30BPQ9UHR5 308 aaKnown RBP11.45□□□□□ -0.58
PCDH9-204ENST00000544246 KCNH3Q9ULD8 1083 aa11.45□□□□□ -0.58
PCDH9-204ENST00000544246 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 VPS41P49754 854 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 GINS2Q9Y248 185 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 DDX39AO00148 427 aaKnown RBP11.44□□□□□ -0.58
PCDH9-204ENST00000544246 SART1O43290 800 aaKnown RBP11.44□□□□□ -0.58
PCDH9-204ENST00000544246 TXKP42681 527 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 SNCBQ16143 134 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 IQCDQ96DY2 449 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 NSD2O96028 1365 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 ADCY8P40145 1251 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 ARHGAP45Q92619 1136 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 GCNT3O95395 438 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 MAP3K7CLP57077 242 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
PCDH9-204ENST00000544246 RAB44Q7Z6P3 723 aaPredicted RBP11.44□□□□□ -0.58
PCDH9-204ENST00000544246 PSMB7Q99436 277 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 ANO3Q9BYT9 981 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 DNM3Q9UQ16 869 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 POLD1P28340 1107 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 NLRP12P59046 1061 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 C4orf50Q6ZRC1 276 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 SKA2Q8WVK7 121 aaPredicted RBP11.44□□□□□ -0.58
PCDH9-204ENST00000544246 CSRNP1Q96S65 589 aa11.44□□□□□ -0.58
PCDH9-204ENST00000544246 ASPHQ12797 758 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 MLKLQ8NB16 471 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 CEP19Q96LK0 163 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 HELLSQ9NRZ9 838 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 MAPK8IP1Q9UQF2 711 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 IVNS1ABPQ9Y6Y0 642 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 RXRBP28702 533 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 GUCY2FP51841 1108 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 TEKT1Q969V4 418 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 MRPL44Q9H9J2 332 aaKnown RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 GSTA4O15217 222 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 CUTAO60888 179 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 PPP2R5AQ15172 486 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 ANO1Q5XXA6 986 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 TYW1Q9NV66 732 aaKnown RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 ECE1P42892 770 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 BAG6P46379 1132 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 TSTA3Q13630 321 aaPredicted RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 NELFBQ8WX92 580 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
PCDH9-204ENST00000544246 EPS15L1Q9UBC2 864 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 ANGPTL3Q9Y5C1 460 aa11.43□□□□□ -0.58
PCDH9-204ENST00000544246 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 STX1BP61266 288 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 RPAINQ86UA6 219 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 GNA14O95837 355 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 PRPSAP1Q14558 356 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 SNX29Q8TEQ0 813 aa11.42□□□□□ -0.58
PCDH9-204ENST00000544246 MYCBPQ99417 103 aaPredicted RBP11.42□□□□□ -0.58
PCDH9-204ENST00000544246 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms