RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 JAKMIP1Q96N16 626 aaKnown RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 ZSCAN10Q96SZ4 725 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 USP26Q9BXU7 913 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 KIAA1683Q9H0B3 1180 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 VCPKMTQ9H867 229 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 ZFYVE28Q9HCC9 887 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 AGTPBP1Q9UPW5 1226 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 TMX2Q9Y320 296 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 CTDP1Q9Y5B0 961 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 TAF6LQ9Y6J9 622 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 TNKSO95271 1327 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
LTBR-212ENST00000543542 GREB1LQ9C091 1923 aaPredicted RBP7.42□□□□□ -1.22
LTBR-212ENST00000543542 THSD7BQ9C0I4 1608 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 LOC285556D6RIA3 1793 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 IGKV6D-41A0A0C4DH26 115 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TESPA1A2RU30 521 aaPredicted RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 CCDC69A6NI79 296 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L15C9J2P7 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L13C9JLJ4 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L11C9JVI0 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L18D6R9N7 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L22D6RA61 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L17D6RBQ6 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L19D6RCP7 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L20D6RJB6 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 F5H6K3 240 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
LTBR-212ENST00000543542 WDR46O15213 610 aaKnown RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 CA12O43570 354 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 SEC24BO95487 1268 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TBC1D8O95759 1140 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 HMGB1P09429 215 aaKnown RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 TOP1P11387 765 aaKnown RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 CASTP20810 708 aaKnown RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 KLRC3Q07444 240 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 USP17L24Q0WX57 530 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 SH3D19Q5HYK7 790 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TREML2Q5T2D2 321 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 SLFN13Q68D06 897 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 SYNE3Q6ZMZ3 975 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 STOX1Q6ZVD7 989 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 DGKHQ86XP1 1220 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 RASEFQ8IZ41 740 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 FAM43AQ8N2R8 423 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 LPAR1Q92633 364 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TTC14Q96N46 770 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 PARK7Q99497 189 aaKnown RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 PTPN18Q99952 460 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TMEM47Q9BQJ4 181 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.41□□□□□ -1.22
LTBR-212ENST00000543542 RPAP3Q9H6T3 665 aaPredicted RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 IL17RBQ9NRM6 502 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 EMILIN3Q9NT22 766 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TCP11L1Q9NUJ3 509 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 RNF186Q9NXI6 227 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 TSKSQ9UJT2 592 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 NAP1L2Q9ULW6 460 aaPredicted RBP7.41□□□□□ -1.22
LTBR-212ENST00000543542 SNX14Q9Y5W7 946 aa7.41□□□□□ -1.22
LTBR-212ENST00000543542 FLOT1O75955 427 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 ECM2O94769 699 aaPredicted RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 NDUFB10O96000 172 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 HSPA1AP0DMV8 641 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 HSPA1BP0DMV9 641 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 CYP2C8P10632 490 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 BMP3P12645 472 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 VCAM1P19320 739 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 SLC1A4P43007 532 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 FAM83BQ5T0W9 1011 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 GPAT2Q6NUI2 795 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 SIAH1Q8IUQ4 282 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 MB21D2Q8IYB1 491 aaPredicted RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 ENAHQ8N8S7 591 aaPredicted RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 JMYQ8N9B5 988 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 PNMA1Q8ND90 353 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 GMCL1P1Q8NEA9 526 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 MKL1Q969V6 931 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 TMEM87BQ96K49 555 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 C12orf42Q96LP6 360 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 NUP88Q99567 741 aaPredicted RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 LRRC2Q9BYS8 371 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.22
LTBR-212ENST00000543542 WBP1LQ9NX94 342 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 SAGE1Q9NXZ1 904 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 CYP46A1Q9Y6A2 500 aa7.4□□□□□ -1.22
LTBR-212ENST00000543542 CEP350Q5VT06 3117 aa7.4□□□□□ -1.23
LTBR-212ENST00000543542 FRMPD2Q68DX3 1309 aaPredicted RBP7.39□□□□□ -1.23
LTBR-212ENST00000543542 TMEM232C9JQI7 657 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 DHX16O60231 1041 aaKnown RBP7.39□□□□□ -1.23
LTBR-212ENST00000543542 CPA1P15085 419 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 SLC4A3P48751 1232 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 CRHR2Q13324 411 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 MOGSQ13724 837 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 PLS1Q14651 629 aa7.39□□□□□ -1.23
LTBR-212ENST00000543542 COG2Q14746 738 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms