RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 ECE1P42892 770 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 ZNF157P51786 506 aaPredicted RBP18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 RCAN1P53805 252 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 SPRYD7Q5W111 196 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 CCDC84Q86UT8 332 aaPredicted RBP18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 C12orf42Q96LP6 360 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 VCPKMTQ9H867 229 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 GPHNQ9NQX3 736 aaPredicted RBP18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 F5H6K3 240 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 SLC10A3P09131 477 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 AK2P54819 239 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 ATP2B2Q01814 1243 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 KLRC3Q07444 240 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 RASAL3Q86YV0 1011 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 LPAR1Q92633 364 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 BRF1Q92994 677 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 ZNF274Q96GC6 653 aaPredicted RBP18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
LRTOMT-219ENST00000541899 A0A0G2JLL6 359 aaPredicted RBP18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 TRIM75PA6NK02 468 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 CALM1P0DP23 149 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 CALM2P0DP24 149 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 CALM3P0DP25 149 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 MCM2P49736 904 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 TROAPQ12815 778 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 SNAPC2Q13487 334 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 MTMR2Q13614 643 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 NFXL1Q6ZNB6 911 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 PRRT2Q7Z6L0 340 aaPredicted RBP18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 FEZ1Q99689 392 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 EMILIN3Q9NT22 766 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
LRTOMT-219ENST00000541899 FAM155AB1AL88 458 aaPredicted RBP18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 DDAH1O94760 285 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 GTF2A2P52657 109 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 C1QTNF8P60827 252 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 DEFB115Q30KQ5 88 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 ZNF654Q8IZM8 581 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 DCAF4Q8WV16 495 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 MS4A4AQ96JQ5 239 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
LRTOMT-219ENST00000541899 NID2Q14112 1375 aa18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 KLF18A0A0U1RQI7 1052 aa18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 TESPA1A2RU30 521 aaPredicted RBP18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 APOBRQ0VD83 1088 aa18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 FASTKD5Q7L8L6 764 aaKnown RBP18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
LRTOMT-219ENST00000541899 WDR46O15213 610 aaKnown RBP18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 ZBTB43O43298 467 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 NDUFB10O96000 172 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 PDHBP11177 359 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 CETPP11597 493 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 PDIA3P30101 505 aaKnown RBP18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 HMGCS2P54868 508 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 INHBEP58166 350 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 MOGSQ13724 837 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 SNX21Q969T3 373 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
LRTOMT-219ENST00000541899 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 PLA2G6O60733 806 aa18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 GRM4Q14833 912 aa18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 KIAA1755Q5JYT7 1200 aa18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 TPCN1Q9ULQ1 816 aa18.15■□□□□ 0.5
LRTOMT-219ENST00000541899 PALM3A6NDB9 673 aaPredicted RBP18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 BMP3P12645 472 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 HSPA6P17066 643 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 HOXA7P31268 230 aaPredicted RBP18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 KIF5BP33176 963 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 SLC1A4P43007 532 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 ZYXQ15942 572 aaKnown RBP18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 HPS5Q9UPZ3 1129 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
LRTOMT-219ENST00000541899 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 VCAM1P19320 739 aa18.13■□□□□ 0.49
LRTOMT-219ENST00000541899 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms