RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 TSPY2A6NKD2 308 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 ZNF213O14771 459 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 ORC4O43929 436 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 RAD21O60216 631 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 RANBP6O60518 1105 aaKnown RBP23.78■■□□□ 1.4
RAP1B-223ENST00000541167 HERVK_113P62684 666 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 CAP1Q01518 475 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 MLLT1Q03111 559 aaPredicted RBP23.78■■□□□ 1.4
RAP1B-223ENST00000541167 PKN2Q16513 984 aaKnown RBP23.78■■□□□ 1.4
RAP1B-223ENST00000541167 RRP12Q5JTH9 1297 aaKnown RBP23.78■■□□□ 1.4
RAP1B-223ENST00000541167 LPAR1Q92633 364 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 CEP95Q96GE4 821 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 P2RX7Q99572 595 aaKnown RBP23.78■■□□□ 1.4
RAP1B-223ENST00000541167 NYAP2Q9P242 653 aa23.78■■□□□ 1.4
RAP1B-223ENST00000541167 SGSM2O43147 1006 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 FAM110CQ1W6H9 321 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 KIAA1755Q5JYT7 1200 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 CATSPERGQ6ZRH7 1159 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 TBC1D10CQ8IV04 446 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 SPICE1Q8N0Z3 855 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 NBPF3Q9H094 633 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 CTNNA3Q9UI47 895 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 PARP14Q460N5 1801 aa23.77■■□□□ 1.4
RAP1B-223ENST00000541167 FGRP09769 529 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 MFSD6Q6ZSS7 791 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 TANGO6Q9C0B7 1094 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 RNF41Q9H4P4 317 aaPredicted RBP23.76■■□□□ 1.39
RAP1B-223ENST00000541167 MTMR4Q9NYA4 1195 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 CLIP2Q9UDT6 1046 aa23.76■■□□□ 1.39
RAP1B-223ENST00000541167 TTLL1O95922 423 aa23.75■■□□□ 1.39
RAP1B-223ENST00000541167 PCP11498 1178 aaKnown RBP23.75■■□□□ 1.39
RAP1B-223ENST00000541167 PSMC4P43686 418 aa23.75■■□□□ 1.39
RAP1B-223ENST00000541167 IMMTQ16891 758 aaKnown RBP23.75■■□□□ 1.39
RAP1B-223ENST00000541167 FBXO46Q6PJ61 603 aaPredicted RBP23.75■■□□□ 1.39
RAP1B-223ENST00000541167 GTF3C2Q8WUA4 911 aaPredicted RBP23.75■■□□□ 1.39
RAP1B-223ENST00000541167 STAG1Q8WVM7 1258 aa23.75■■□□□ 1.39
RAP1B-223ENST00000541167 RLFQ13129 1914 aa23.74■■□□□ 1.39
RAP1B-223ENST00000541167 CCDC85CA6NKD9 419 aa23.74■■□□□ 1.39
RAP1B-223ENST00000541167 WDR46O15213 610 aaKnown RBP23.74■■□□□ 1.39
RAP1B-223ENST00000541167 FMNL1O95466 1100 aaPredicted RBP23.74■■□□□ 1.39
RAP1B-223ENST00000541167 CTGFP29279 349 aa23.74■■□□□ 1.39
RAP1B-223ENST00000541167 FCGRTP55899 365 aa23.74■■□□□ 1.39
RAP1B-223ENST00000541167 LRRC47Q8N1G4 583 aaKnown RBP23.74■■□□□ 1.39
RAP1B-223ENST00000541167 PTH1RQ03431 593 aa23.73■■□□□ 1.39
RAP1B-223ENST00000541167 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
RAP1B-223ENST00000541167 TRIM47Q96LD4 638 aa23.73■■□□□ 1.39
RAP1B-223ENST00000541167 PAGR1Q9BTK6 254 aa23.73■■□□□ 1.39
RAP1B-223ENST00000541167 MORF4L1Q9UBU8 362 aa23.73■■□□□ 1.39
RAP1B-223ENST00000541167 GNRH1P01148 92 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 ESYT1Q9BSJ8 1104 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 TXNRD2Q9NNW7 524 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 STX8Q9UNK0 236 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 PTPN22Q9Y2R2 807 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 NEDD4P46934 1319 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 A0A0G2JMZ2 1700 aa23.72■■□□□ 1.39
RAP1B-223ENST00000541167 SPDYE16A6NNV3 312 aaPredicted RBP23.71■■□□□ 1.39
RAP1B-223ENST00000541167 F5H6K3 240 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 NMT2O60551 498 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 PEX10O60683 326 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 FLOT1O75955 427 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 KLRC3Q07444 240 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 COG2Q14746 738 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 KIAA1211Q6ZU35 1233 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 MKL1Q969V6 931 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 RBPJLQ9UBG7 517 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 SYNPO2Q9UMS6 1093 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 HPS5Q9UPZ3 1129 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 U3KPZ7 1027 aaPredicted RBP23.71■■□□□ 1.39
RAP1B-223ENST00000541167 DOCK3Q8IZD9 2030 aa23.71■■□□□ 1.39
RAP1B-223ENST00000541167 TNPO2O14787 897 aaKnown RBP23.7■■□□□ 1.38
RAP1B-223ENST00000541167 CDC45O75419 566 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 NDUFB10O96000 172 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 HOXD10P28358 340 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 FAM83BQ5T0W9 1011 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 SAMD1Q6SPF0 538 aaPredicted RBP23.7■■□□□ 1.38
RAP1B-223ENST00000541167 CASC1Q6TDU7 716 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 GPRC5AQ8NFJ5 357 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 ESR2Q92731 530 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 IL17RBQ9NRM6 502 aa23.7■■□□□ 1.38
RAP1B-223ENST00000541167 COL11A1P12107 1806 aaPredicted RBP23.7■■□□□ 1.38
RAP1B-223ENST00000541167 MYPNQ86TC9 1320 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 RGS19P49795 217 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 PRMT2P55345 433 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 ERVK-9P63128 1117 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 ERVK-24P63145 666 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 NUP88Q99567 741 aaPredicted RBP23.69■■□□□ 1.38
RAP1B-223ENST00000541167 HOXC10Q9NYD6 342 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 RABGAP1Q9Y3P9 1069 aa23.69■■□□□ 1.38
RAP1B-223ENST00000541167 POTEEQ6S8J3 1075 aa23.68■■□□□ 1.38
RAP1B-223ENST00000541167 GMCL1P1Q8NEA9 526 aa23.68■■□□□ 1.38
RAP1B-223ENST00000541167 SRRDQ9UH36 339 aa23.68■■□□□ 1.38
RAP1B-223ENST00000541167 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
RAP1B-223ENST00000541167 B4E1Z4 1266 aa23.67■■□□□ 1.38
RAP1B-223ENST00000541167 DSG3P32926 999 aa23.67■■□□□ 1.38
RAP1B-223ENST00000541167 NT5C2P49902 561 aa23.67■■□□□ 1.38
RAP1B-223ENST00000541167 SLFN13Q68D06 897 aa23.67■■□□□ 1.38
RAP1B-223ENST00000541167 NKX2-3Q8TAU0 364 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms