RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 NOVP48745 357 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 ZNF165P49910 485 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 NLRP5P59047 1200 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 C1QTNF8P60827 252 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 PKN1Q16512 942 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 ANO6Q4KMQ2 910 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 AXDND1Q5T1B0 1012 aaPredicted RBP11.67□□□□□ -0.54
SPARC-209ENST00000539687 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 RCSD1Q6JBY9 416 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.67□□□□□ -0.54
SPARC-209ENST00000539687 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 EHD4Q9H223 541 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 GOLPH3LQ9H4A5 285 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
SPARC-209ENST00000539687 ZNF202O95125 648 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 PARP1P09874 1014 aaKnown RBP11.66□□□□□ -0.54
SPARC-209ENST00000539687 PFKFB1P16118 471 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 PTPREP23469 700 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 PLCD1P51178 756 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 NDUFA8P51970 172 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
SPARC-209ENST00000539687 GRIK5Q16478 980 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
SPARC-209ENST00000539687 DAGLBQ8NCG7 672 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 DYNLL2Q96FJ2 89 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 GJB4Q9NTQ9 266 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 USP40Q9NVE5 1235 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
SPARC-209ENST00000539687 SERPINB13Q9UIV8 391 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 STX8Q9UNK0 236 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
SPARC-209ENST00000539687 A0A1B0GVL5 298 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
SPARC-209ENST00000539687 BECN2A8MW95 431 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 MYO1BO43795 1136 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 CLCN1P35523 988 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 CRKP46108 304 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 ASPRV1Q53RT3 343 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 TMEM47Q9BQJ4 181 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 OSBPL5Q9H0X9 879 aaPredicted RBP11.65□□□□□ -0.54
SPARC-209ENST00000539687 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 KIAA1468Q9P260 1216 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 SEC63Q9UGP8 760 aaKnown RBP11.65□□□□□ -0.54
SPARC-209ENST00000539687 DACH1Q9UI36 760 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 SRPRBQ9Y5M8 271 aaKnown RBP11.65□□□□□ -0.54
SPARC-209ENST00000539687 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
SPARC-209ENST00000539687 COL2A1P02458 1487 aaPredicted RBP11.64□□□□□ -0.55
SPARC-209ENST00000539687 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 SMTNL1A8MU46 457 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 ECE2O60344 883 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 NMT2O60551 498 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 ADCY5O95622 1261 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
SPARC-209ENST00000539687 GNA11P29992 359 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 MMP14P50281 582 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 GABPAQ06546 454 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
SPARC-209ENST00000539687 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 RRP36Q96EU6 259 aaKnown RBP11.64□□□□□ -0.55
SPARC-209ENST00000539687 IDI2Q9BXS1 227 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 CABP5Q9NP86 173 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 PCDHA4Q9UN74 947 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 MYH6P13533 1939 aa11.64□□□□□ -0.55
SPARC-209ENST00000539687 CDK5RAP2Q96SN8 1893 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 MYH1P12882 1939 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 SMIM22K7EJ46 135 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 LAD1O00515 517 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
SPARC-209ENST00000539687 TTLL1O95922 423 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 NLRP12P59046 1061 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 CT47A1Q5JQC4 288 aaPredicted RBP11.63□□□□□ -0.55
SPARC-209ENST00000539687 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 DACT2Q5SW24 774 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
SPARC-209ENST00000539687 SHC4Q6S5L8 630 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 SARM1Q6SZW1 724 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 BLIDQ8IZY5 108 aa11.63□□□□□ -0.55
SPARC-209ENST00000539687 CMTR1Q8N1G2 835 aaKnown RBP11.63□□□□□ -0.55
SPARC-209ENST00000539687 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms