RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SART3Q15020 963 aaKnown RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 PAPD7Q5XG87 772 aaKnown RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 TMTC2Q8N394 836 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
RAB40C-205ENST00000539661 ZC3H4Q9UPT8 1303 aaKnown RBP19.85■□□□□ 0.77
RAB40C-205ENST00000539661 A0A087X0B3 334 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 PATL2C9JE40 543 aaKnown RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 NDUFA10O95299 355 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 PDE6AP16499 860 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 IFIT5Q13325 482 aaKnown RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 EHBP1Q8NDI1 1231 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 CDHR2Q9BYE9 1310 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 KRT9P35527 623 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 CCT6AP40227 531 aaKnown RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 TRIM28Q13263 835 aaKnown RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 TADA2BQ86TJ2 420 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 AIDAQ96BJ3 306 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 PIH1D3Q9NQM4 214 aaKnown RBP19.84■□□□□ 0.77
RAB40C-205ENST00000539661 CTNND2Q9UQB3 1225 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 SAR1BQ9Y6B6 198 aa19.84■□□□□ 0.77
RAB40C-205ENST00000539661 TCRBV5S4A2TA0A5A2 114 aa19.83■□□□□ 0.77
RAB40C-205ENST00000539661 ATP2B1P20020 1258 aa19.83■□□□□ 0.77
RAB40C-205ENST00000539661 AKNAD1Q5T1N1 836 aa19.83■□□□□ 0.77
RAB40C-205ENST00000539661 PYM1Q9BRP8 204 aaKnown RBP19.83■□□□□ 0.76
RAB40C-205ENST00000539661 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 IDH1O75874 414 aaKnown RBP19.82■□□□□ 0.76
RAB40C-205ENST00000539661 PCCAP05165 728 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-205ENST00000539661 XBP1P17861 261 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 WTAPQ15007 396 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 METTL24Q5JXM2 366 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 IFNL3Q8IZI9 196 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 SYMPKQ92797 1274 aaKnown RBP19.82■□□□□ 0.76
RAB40C-205ENST00000539661 EPSTI1Q96J88 318 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 CRACR2AQ9BSW2 395 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 NAPBQ9H115 298 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 DEF6Q9H4E7 631 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 RIPOR2Q9Y4F9 1068 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 PPP2R5BQ15173 497 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 TCP11X2Q5H9J9 407 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 OXER1Q8TDS5 423 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 GUCA1BQ9UMX6 200 aa19.82■□□□□ 0.76
RAB40C-205ENST00000539661 REXO2Q9Y3B8 237 aaKnown RBP19.82■□□□□ 0.76
RAB40C-205ENST00000539661 TCIRG1Q13488 830 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 MFSD6Q6ZSS7 791 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 CADPS2Q86UW7 1296 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 SMYD4Q8IYR2 804 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-205ENST00000539661 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-205ENST00000539661 COL18A1P39060 1754 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 ALS2Q96Q42 1657 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 ERICH2A1L162 156 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 RNF225M0QZC1 329 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-205ENST00000539661 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
RAB40C-205ENST00000539661 OR8K1Q8NGG5 319 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 FAM76AQ8TAV0 307 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 RUBCNQ92622 972 aa19.81■□□□□ 0.76
RAB40C-205ENST00000539661 A1BGP04217 495 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 UQCRFS1P1P0C7P4 283 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 PAK1Q13153 545 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 MMS22LQ6ZRQ5 1243 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 STAG1Q8WVM7 1258 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 MMS19Q96T76 1030 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 VPS16Q9H269 839 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 EPB41L4AQ9HCS5 686 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-205ENST00000539661 KCNJ18B7U540 433 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 ARID4AP29374 1257 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-205ENST00000539661 KRT83P78385 493 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 KCNJ12Q14500 433 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 IQCEQ6IPM2 695 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 DNAJC7Q99615 494 aa19.8■□□□□ 0.76
RAB40C-205ENST00000539661 CDC25AP30304 524 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 RRAGBQ5VZM2 374 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 CCNI2Q6ZMN8 369 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-205ENST00000539661 GBP6Q6ZN66 633 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 FANCBQ8NB91 859 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 CHP1Q99653 195 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 INCENPQ9NQS7 918 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 KCPQ6ZWJ8 1503 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 MYH6P13533 1939 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 A0A1W2PQC6 194 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 ANO9A1A5B4 782 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 CASP1P29466 404 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 KRT2P35908 639 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 GGCXP38435 758 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 SWT1Q5T5J6 900 aaKnown RBP19.79■□□□□ 0.76
RAB40C-205ENST00000539661 PRDM11Q9NQV5 511 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 RMND1Q9NWS8 449 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 TAB2Q9NYJ8 693 aa19.79■□□□□ 0.76
RAB40C-205ENST00000539661 ATP1A1P05023 1023 aaKnown RBP19.78■□□□□ 0.76
RAB40C-205ENST00000539661 DISP2A7MBM2 1401 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 KAT6BQ8WYB5 2073 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 KRT86O43790 486 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 GTPBP6O43824 516 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-205ENST00000539661 TSR1Q2NL82 804 aaKnown RBP19.78■□□□□ 0.76
RAB40C-205ENST00000539661 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 ZBTB38Q8NAP3 1195 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-205ENST00000539661 ZBTB9Q96C00 473 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms